RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 EHHADHQ08426 723 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 RAD51AP2Q09MP3 1159 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 COASYQ13057 564 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 LRRC41Q15345 812 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 LRCH2Q5VUJ6 765 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 C9orf131Q5VYM1 1079 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 OTOP1Q7RTM1 612 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 GPBP1Q86WP2 473 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 SLC5A5Q92911 643 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 EIF2AK1Q9BQI3 630 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 LRRC27Q9C0I9 530 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 ADARB2Q9NS39 739 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 RGL1Q9NZL6 768 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 WDR90Q96KV7 1748 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 RPTORQ8N122 1335 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 N4BP3O15049 544 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 DKK1O94907 266 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 CYP11B2P19099 503 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 ADKP55263 362 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 NBPF20Q3BBV1 942 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 SUPT20HL1Q3ZLR7 823 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 FILIP1LQ4L180 1135 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 ARSHQ5FYA8 562 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 TRIM50Q86XT4 487 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 CSGALNACT2Q8N6G5 542 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 CLP1Q92989 425 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 PURBQ96QR8 312 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 PANK4Q9NVE7 773 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 TRMT1Q9NXH9 659 aaKnown RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 TBC1D7Q9P0N9 293 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 RIPK3Q9Y572 518 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 CTDP1Q9Y5B0 961 aaPredicted RBP10.25□□□□□ -0.77
ATG4A-202ENST00000345734 OTOFQ9HC10 1997 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 PTPRFP10586 1907 aa10.25□□□□□ -0.77
ATG4A-202ENST00000345734 PITPNM2Q9BZ72 1349 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 ITGB5P18084 799 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 SCTRP47872 440 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 RPS6P62753 249 aaKnown RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 SPAG1Q07617 926 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 CTTNQ14247 550 aaKnown RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 NOL9Q5SY16 702 aaKnown RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 MCF2L2Q86YR7 1114 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 TC2NQ8N9U0 490 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 C12orf42Q96LP6 360 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 TRERF1Q96PN7 1200 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 TAAR1Q96RJ0 339 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 FGFBP2Q9BYJ0 223 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 TMX1Q9H3N1 280 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 THAP9Q9H5L6 903 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 PKD2L1Q9P0L9 805 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 AFG3L2Q9Y4W6 797 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 BICDL2A1A5D9 508 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 NKRFO15226 690 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 GAS7O60861 476 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 GHRHRQ02643 423 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 VGLL4Q14135 290 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 E4F1Q66K89 784 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 CENPPQ6IPU0 288 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 TMEM139Q8IV31 216 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 CCAR2Q8N163 923 aaKnown RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 REPS2Q8NFH8 660 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 DYDC2Q96IM9 177 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 C16orf45Q96MC5 204 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 MXRA8Q9BRK3 442 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 ZNF577Q9BSK1 485 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 POLR3CQ9BUI4 534 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-202ENST00000345734 UNC45AQ9H3U1 944 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 DNM3Q9UQ16 869 aa10.24□□□□□ -0.77
ATG4A-202ENST00000345734 C19orf81C9J6K1 198 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 SLITRK3O94933 977 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 KRT18P05783 430 aaKnown RBP10.23□□□□□ -0.77
ATG4A-202ENST00000345734 EIF2AK2P19525 551 aaKnown RBP10.23□□□□□ -0.77
ATG4A-202ENST00000345734 MRPS9P82933 396 aaKnown RBP10.23□□□□□ -0.77
ATG4A-202ENST00000345734 RBL2Q08999 1139 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 PSMD2Q13200 908 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 GUF1Q8N442 669 aaKnown RBP10.23□□□□□ -0.77
ATG4A-202ENST00000345734 ANKRD20A12PQ8NF67 263 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 CPLX3Q8WVH0 158 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 DCPSQ96C86 337 aaKnown RBP10.23□□□□□ -0.77
ATG4A-202ENST00000345734 HSD17B14Q9BPX1 270 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 MKNK1Q9BUB5 465 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 PCDHA2Q9Y5H9 948 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 SNCAIPQ9Y6H5 919 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 KIAA1217Q5T5P2 1943 aa10.23□□□□□ -0.77
ATG4A-202ENST00000345734 DDX39AO00148 427 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 IPO5O00410 1097 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 ZBTB39O15060 712 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 LZTS3O60299 673 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 ZSCAN20P17040 1043 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms