RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 COPS5Q92905 334 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 CTAGE1Q96RT6 745 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 TMEM60Q9H2L4 133 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 A0A087X0B3 334 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 SLFN14P0C7P3 912 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 KCNJ6P48051 423 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 PDE4DQ08499 809 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 RBL2Q08999 1139 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 MOXD1Q6UVY6 613 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 RNF207Q6ZRF8 634 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 SESTD1Q86VW0 696 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 CCDC155Q8N6L0 562 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 PDILTQ8N807 584 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 TRIML1Q8N9V2 468 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 IQUBQ8NA54 791 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 GDPD5Q8WTR4 605 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 DHX58Q96C10 678 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 ANO3Q9BYT9 981 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 CCSER1Q9C0I3 900 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 CD320Q9NPF0 282 aa15.11■□□□□ 0.01
HERPUD1-202ENST00000344114 BRWD1Q9NSI6 2320 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 ABCB11O95342 1321 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 MEIS2O14770 477 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 ARIH2O95376 493 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 CXCL10P02778 98 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 IQCB1Q15051 598 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 E2F4Q16254 413 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 PTGISQ16647 500 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 USH1GQ495M9 461 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 NT5DC1Q5TFE4 455 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 LUZP1Q86V48 1076 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 ERCC4Q92889 916 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 PNMA2Q9UL42 364 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 NOD1Q9Y239 953 aa15.1■□□□□ 0.01
HERPUD1-202ENST00000344114 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 FAM86C2PA6NEL3 165 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 GOLGA6L19H0YKK7 550 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 PIK3CDO00329 1044 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 SMC2O95347 1197 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 PARNO95453 639 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 TXNP10599 105 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 USP11P51784 963 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 ERVK-21P61565 698 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 DEFB103AP81534 67 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 CALCRLQ16602 461 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 TMEM266Q2M3C6 531 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 CNKSR3Q6P9H4 555 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 TMCO2Q7Z6W1 182 aaPredicted RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 DHX38Q92620 1227 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 SMARCE1Q969G3 411 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 TRIM44Q96DX7 344 aaPredicted RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 MTMR9Q96QG7 549 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 RAB34Q9BZG1 259 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 MAGEF1Q9HAY2 307 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 DISC1Q9NRI5 854 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 CCDC39Q9UFE4 941 aa15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 MRPL11Q9Y3B7 192 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-202ENST00000344114 SPDYE3A6NKU9 549 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 GJB5O95377 273 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 TDP2O95551 362 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 PRR29P0C7W0 189 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 SELPP16109 830 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 UBA7P41226 1012 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
HERPUD1-202ENST00000344114 DPCR1Q3MIW9 517 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 GDF6Q6KF10 455 aaPredicted RBP15.08■□□□□ 0
HERPUD1-202ENST00000344114 CCDC62Q6P9F0 684 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 LRRC8DQ7L1W4 858 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 SPATA20Q8TB22 786 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 RAD9AQ99638 391 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 CUEDC2Q9H467 287 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 UBE2ZQ9H832 354 aaPredicted RBP15.08■□□□□ 0
HERPUD1-202ENST00000344114 SUGCTQ9HAC7 445 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 DDX25Q9UHL0 483 aaKnown RBP15.08■□□□□ 0
HERPUD1-202ENST00000344114 DACH1Q9UI36 760 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 PCDHA5Q9Y5H7 936 aa15.08■□□□□ 0
HERPUD1-202ENST00000344114 MICAL3Q7RTP6 2002 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 CYP3A7-CYP3A51PA0A087WV96 503 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 BECN2A8MW95 431 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 B4DLN1 442 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 BIN1O00499 593 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 OPLAHO14841 1288 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 SLC37A4O43826 429 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 EDIL3O43854 480 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 NBNO60934 754 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 MMP3P08254 477 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 CYP3A7P24462 503 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 SREBF1P36956 1147 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 STAT6P42226 847 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 SARSP49591 514 aaKnown RBP15.07■□□□□ 0
HERPUD1-202ENST00000344114 TCTN1Q2MV58 587 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 LEXMQ3ZCV2 418 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 PDXDC2PQ6P474 469 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 FAM178BQ8IXR5 827 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 IGSF22Q8N9C0 903 aa15.07■□□□□ 0
HERPUD1-202ENST00000344114 KAT2BQ92831 832 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms