RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FSBPO95073 299 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 IFNB1P01574 187 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 YWHAEP62258 255 aaKnown RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 SNX1Q13596 522 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 RFFLQ8WZ73 363 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 RAD54LQ92698 747 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 FAM212AQ96EL1 285 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 NOD2Q9HC29 1040 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PACSIN2Q9UNF0 486 aaPredicted RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PNPLA7Q6ZV29 1317 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PITPNM2Q9BZ72 1349 aa5.15□□□□□ -1.58
CSMD3-203ENST00000343508 PLA2G4BP0C869 781 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 COPS2P61201 443 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 ESRRGP62508 458 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 DDR1Q08345 913 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 GJA10Q969M2 543 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 PIH1D3Q9NQM4 214 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 ZFP69BQ9UJL9 534 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 RIMS1Q86UR5 1692 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 XRN1Q8IZH2 1706 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 DIP2AQ14689 1571 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 CCT8L1PA6NM43 557 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 K7ENM7 598 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 GOLGA8HP0CJ92 632 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 GYG1P46976 350 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 GEN1Q17RS7 908 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 MAPKAPK5Q8IW41 473 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 ROPN1BQ9BZX4 212 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 ROPN1Q9HAT0 212 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 H3BQF6 201 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 CA4P22748 312 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 TRMT10CQ7L0Y3 403 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 MAEAQ7L5Y9 396 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 NLRP7Q8WX94 980 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 FGD4Q96M96 766 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 NACC1Q96RE7 527 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 CCDC87Q9NVE4 849 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 CREB3O43889 395 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 FOSP01100 380 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 CHN1P15882 459 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 POLR2BP30876 1174 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 SCTRP47872 440 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 SLC8A3P57103 927 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 ODR4Q5SWX8 454 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 RINT1Q6NUQ1 792 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 SYT2Q8N9I0 419 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 RBM17Q96I25 401 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 UBE2TQ9NPD8 197 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 VPS41P49754 854 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 SWT1Q5T5J6 900 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 DRC3Q9H069 523 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 DDX47Q9H0S4 455 aaKnown RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 ATP6V0A4Q9HBG4 840 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 CD248Q9HCU0 757 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 TFCP2L1Q9NZI6 479 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 GGA1Q9UJY5 639 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 SRRM3A6NNA2 597 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 F8W031 263 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 DAPK3O43293 454 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 PTPAQ15257 358 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 MIER3Q7Z3K6 550 aa5.15□□□□□ -1.59
CSMD3-203ENST00000343508 TSPYL2Q9H2G4 693 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-203ENST00000343508 GSTA2P09210 222 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RAD23BP54727 409 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ERVK-24P63145 666 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 KRT39Q6A163 491 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PPP1R18Q6NYC8 613 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 FAM47EQ6ZV65 393 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 OXER1Q8TDS5 423 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 AZI2Q9H6S1 392 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 NWD1Q149M9 1564 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 C3P01024 1663 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CDH16O75309 829 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CTAGE3PQ8IX95 158 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TRIM9Q9C026 710 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PPCSQ9HAB8 311 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PRKAB2O43741 272 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RNF8O76064 485 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ACTN1P12814 892 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 LTKP29376 864 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CARSP49589 748 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ADCY1Q08828 1119 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 KPNB1Q14974 876 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TBC1D9BQ66K14 1250 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 WDR75Q8IWA0 830 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TTLL11Q8NHH1 800 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SPAG7O75391 227 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ATP6V1G2O95670 118 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SARSP49591 514 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 GNPTABQ3T906 1256 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SPDYCQ5MJ68 293 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TTBK2Q6IQ55 1244 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CASC4Q6P4E1 433 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 NT5C1BQ96P26 610 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ASAP2O43150 1006 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SYF2O95926 243 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 STAT4Q14765 748 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 KNOP1Q1ED39 458 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms