RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 INO80B-WBP1J3KQ70 363 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ACSL3O95573 720 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 PEX3P56589 373 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 TFAMQ00059 246 aaKnown RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 SCARA5Q6ZMJ2 495 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ARHGAP24Q8N264 748 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 NME8Q8N427 588 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 ATP6V0A1Q93050 837 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 INO80BQ9C086 356 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 DHX36Q9H2U1 1008 aaKnown RBP8.7□□□□□ -1.02
UBE4B-202ENST00000343090 SNX24Q9Y343 169 aa8.7□□□□□ -1.02
UBE4B-202ENST00000343090 GMNCA6NCL1 334 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 RPS6KA4O75676 772 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 GRIN1Q05586 938 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 SH2D3CQ8N5H7 860 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 PIK3R5Q8WYR1 880 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 TMEM206Q9H813 350 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 NRBP2Q9NSY0 501 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 CEP72Q9P209 647 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 RNF14Q9UBS8 474 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 MAGED2Q9UNF1 606 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 H0YCG3 227 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ZNF185O15231 689 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 NR3C1P04150 777 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 RASSF2P50749 326 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ZNF211Q13398 564 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 PDIA6Q15084 440 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 BRDTQ58F21 947 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 FAM83BQ5T0W9 1011 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 DCAF15Q66K64 600 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ANKRD40Q6AI12 368 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 SLC7A3Q8WY07 619 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ATP2A3Q93084 1043 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ZBTB10Q96DT7 871 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 EPN3Q9H201 632 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 EPB41L4AQ9HCS5 686 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 TRIM10Q9UDY6 481 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 CAMSAP1Q5T5Y3 1602 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 OVOS2A0A0J9YW53 1432 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 OVOS2Q6IE36 1432 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 NPHP3-ACAD11A0A0J9YXS1 232 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 CAPN9O14815 690 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 CREB3O43889 395 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 SUN1O94901 812 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 PDHA1P08559 390 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 RFX5P48382 616 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 NXNQ6DKJ4 435 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 IL17RAQ96F46 866 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 RUNDC3BQ96NL0 473 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 OSBPL9Q96SU4 736 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 SCOCQ9UIL1 159 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 WDR91A4D1P6 747 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 LRRIQ3A6PVS8 624 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 GCLMP48507 274 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 BPIFB4P59827 614 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 GABPAQ06546 454 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ADGRF4Q8IZF3 695 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 NEK9Q8TD19 979 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 ZMYND12Q9H0C1 365 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 VCX3BQ9H321 246 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 TDRD3Q9H7E2 651 aaKnown RBP8.69□□□□□ -1.02
UBE4B-202ENST00000343090 VCX3AQ9NNX9 186 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 HESX1Q9UBX0 185 aa8.69□□□□□ -1.02
UBE4B-202ENST00000343090 UTYO14607 1347 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 OPHN1O60890 802 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 CRKP46108 304 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 CLEC10AQ8IUN9 316 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 NOA1Q8NC60 698 aaKnown RBP8.68□□□□□ -1.02
UBE4B-202ENST00000343090 BBOF1Q8ND07 529 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 COA1Q9GZY4 146 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 PFDN4Q9NQP4 134 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 NARFQ9UHQ1 456 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 RASGRF2O14827 1237 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 GPSM2P81274 684 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 IL9RQ01113 521 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 DRP2Q13474 957 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 C10orf76Q5T2E6 689 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 ZNF746Q6NUN9 644 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-202ENST00000343090 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 DYDC2Q96IM9 177 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 L1RE1Q9UN81 338 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 SKAP2O75563 359 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-202ENST00000343090 FXR1P51114 621 aaKnown RBP eCLIP8.68□□□□□ -1.02
UBE4B-202ENST00000343090 SLC12A2P55011 1212 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 SLC30A9Q6PML9 568 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 FLAD1Q8NFF5 587 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 ARHGEF1Q92888 912 aaKnown RBP8.68□□□□□ -1.02
UBE4B-202ENST00000343090 ABTB1Q969K4 478 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-202ENST00000343090 CCT8L2Q96SF2 557 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 HEMGNQ9BXL5 484 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 ZNF341Q9BYN7 854 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 PNPLA7Q6ZV29 1317 aa8.68□□□□□ -1.02
UBE4B-202ENST00000343090 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms