RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 C6orf222P0C671 652 aaPredicted RBP18.19■□□□□ 0.5
SNED1-202ENST00000342631 CUL4BQ13620 913 aa18.19■□□□□ 0.5
SNED1-202ENST00000342631 XKR9Q5GH70 373 aa18.19■□□□□ 0.5
SNED1-202ENST00000342631 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
SNED1-202ENST00000342631 C1orf186Q6ZWK4 172 aa18.19■□□□□ 0.5
SNED1-202ENST00000342631 TRIML1Q8N9V2 468 aa18.19■□□□□ 0.5
SNED1-202ENST00000342631 LENG1Q96BZ8 264 aaPredicted RBP18.19■□□□□ 0.5
SNED1-202ENST00000342631 CEP170P1Q96L14 293 aa18.19■□□□□ 0.5
SNED1-202ENST00000342631 TUT1Q9H6E5 874 aaKnown RBP18.19■□□□□ 0.5
SNED1-202ENST00000342631 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
SNED1-202ENST00000342631 SEPT9Q9UHD8 586 aaPredicted RBP18.19■□□□□ 0.5
SNED1-202ENST00000342631 PRR29P0C7W0 189 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 GUCY2CP25092 1073 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 KCNB1Q14721 858 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 PLCB4Q15147 1175 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 PADI6Q6TGC4 694 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 SASS6Q6UVJ0 657 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 KATNAL1Q9BW62 490 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 GZF1Q9H116 711 aaPredicted RBP18.18■□□□□ 0.5
SNED1-202ENST00000342631 ARID2Q68CP9 1835 aa18.18■□□□□ 0.5
SNED1-202ENST00000342631 A0A087WWV3 80 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 SYCE3A1L190 88 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 ADAMTS4O75173 837 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 DGAT1O75907 488 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 F2P00734 622 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 KRT18P05783 430 aaKnown RBP18.17■□□□□ 0.5
SNED1-202ENST00000342631 ZNF445P59923 1031 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 ASIC1P78348 528 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 ARSHQ5FYA8 562 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 GNASQ5JWF2 1037 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 UNC13DQ70J99 1090 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 TRIM50Q86XT4 487 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 BLZF1Q9H2G9 400 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 ODF2LQ9ULJ1 636 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.17■□□□□ 0.5
SNED1-202ENST00000342631 RPN1P04843 607 aaKnown RBP18.17■□□□□ 0.5
SNED1-202ENST00000342631 RFC5P40937 340 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 TARBP2Q15633 366 aaKnown RBP18.17■□□□□ 0.5
SNED1-202ENST00000342631 RNF180Q86T96 592 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
SNED1-202ENST00000342631 KLHDC9Q8NEP7 349 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 DNAJC19Q96DA6 116 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 COL1A2P08123 1366 aa18.17■□□□□ 0.5
SNED1-202ENST00000342631 ZNF286BP0CG31 522 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 GIT2Q14161 759 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 ZNF484Q5JVG2 852 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 PLA2G4FQ68DD2 849 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 CCDC65Q8IXS2 484 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 MCPH1Q8NEM0 835 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 JPH2Q9BR39 696 aaPredicted RBP18.16■□□□□ 0.5
SNED1-202ENST00000342631 RUSC1Q9BVN2 902 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNED1-202ENST00000342631 TRPC6Q9Y210 931 aa18.16■□□□□ 0.5
SNED1-202ENST00000342631 FRMD3A2A2Y4 597 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 PGK1P00558 417 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 MARK3P27448 753 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 NPEPPSP55786 919 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 PURAQ00577 322 aaKnown RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 HAS3O00219 553 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 GAS2O43903 313 aaKnown RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 KLRC4O43908 158 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 RHOBTB3O94955 611 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 MYL3P08590 195 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 GAP43P17677 238 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 CASP1P29466 404 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 BEX3Q00994 111 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 PSMD2Q13200 908 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 MTERF2Q49AM1 385 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 LHX8Q68G74 356 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 SLC7A3Q8WY07 619 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 ERCC4Q92889 916 aaPredicted RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 REEP2Q9BRK0 252 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 TSEN34Q9BSV6 310 aaKnown RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 MTG1Q9BT17 334 aaPredicted RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 RNPEPQ9H4A4 650 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 DHX33Q9H6R0 707 aaKnown RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 ATP6V0A4Q9HBG4 840 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 PAK6Q9NQU5 681 aaPredicted RBP18.15■□□□□ 0.5
SNED1-202ENST00000342631 PDLIM7Q9NR12 457 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 COL4A3BPQ9Y5P4 624 aa18.15■□□□□ 0.5
SNED1-202ENST00000342631 TMEM150BA6NC51 233 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 TBCAO75347 108 aaKnown RBP18.14■□□□□ 0.49
SNED1-202ENST00000342631 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 TRMT1LQ7Z2T5 733 aaKnown RBP18.14■□□□□ 0.49
SNED1-202ENST00000342631 ARRDC4Q8NCT1 418 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 KAT2BQ92831 832 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 DRC1Q96MC2 740 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 CEP89Q96ST8 783 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 EXOC1Q9NV70 894 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 SEL1LQ9UBV2 794 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 MAN1B1Q9UKM7 699 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 FRMPD3Q5JV73 1810 aa18.14■□□□□ 0.49
SNED1-202ENST00000342631 RRN3P2A6NIE6 340 aa18.13■□□□□ 0.49
SNED1-202ENST00000342631 USO1O60763 962 aaKnown RBP18.13■□□□□ 0.49
SNED1-202ENST00000342631 CABYRO75952 493 aa18.13■□□□□ 0.49
SNED1-202ENST00000342631 IDEP14735 1019 aa18.13■□□□□ 0.49
SNED1-202ENST00000342631 PSEN2P49810 448 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms