RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PDZD8Q8NEN9 1154 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 CHAMP1Q96JM3 812 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 C2orf40Q9H1Z8 148 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 MGEA5O60502 916 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 MUM1Q2TAK8 710 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 SWSAP1Q6NVH7 229 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 SP8Q8IXZ3 490 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 ENOX1Q8TC92 643 aaKnown RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 TMEM106CQ9BVX2 250 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 F5H6K3 240 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 MT-ND3P03897 115 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 KLRC3Q07444 240 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 TMED2Q15363 201 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 TDRD7Q8NHU6 1098 aaKnown RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 DHX38Q92620 1227 aaKnown RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 CFAP36Q96G28 342 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 MMTAG2Q9BU76 263 aaKnown RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 CAPS2Q9BXY5 557 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 INTS9Q9NV88 658 aaKnown RBP16.13■□□□□ 0.17
UBE3B-202ENST00000342494 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
UBE3B-202ENST00000342494 CDHR2Q9BYE9 1310 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 POTEMA6NI47 508 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 SERPINB6P35237 376 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 IFNAR2P48551 515 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 GPC3P51654 580 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 TRIP13Q15645 432 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-202ENST00000342494 BBS9Q3SYG4 887 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 FAM20AQ96MK3 541 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 GCOM2Q9BZD3 368 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-202ENST00000342494 XXYLT1Q8NBI6 393 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 PBKQ96KB5 322 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 GABBR1Q9UBS5 961 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 ATP8A1Q9Y2Q0 1164 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 MOCS3O95396 460 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 RNF217Q8TC41 542 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 TACO1Q9BSH4 297 aaKnown RBP16.12■□□□□ 0.17
UBE3B-202ENST00000342494 NHEJ1Q9H9Q4 299 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-202ENST00000342494 CDC42BPGQ6DT37 1551 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 ASB14A6NK59 587 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 SLC16A4O15374 487 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 KCNQ2O43526 872 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 FDX1P10109 184 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 RCN2Q14257 317 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 NFIXQ14938 502 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 PFKFB3Q16875 520 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-202ENST00000342494 C11orf57Q6ZUT1 292 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-202ENST00000342494 TMEM35BQ8NCS4 154 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 DYDC2Q96IM9 177 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 VPS39Q96JC1 886 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 IGKV5-2P06315 115 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 EPHA10Q5JZY3 1008 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 TTC30BQ8N4P2 665 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 FAM213AQ9BRX8 229 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 MBD5Q9P267 1494 aa16.12■□□□□ 0.17
UBE3B-202ENST00000342494 EVI5O60447 810 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 TOGARAM2Q6ZUX3 1019 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 SFR1Q86XK3 245 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 NEK9Q8TD19 979 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 DEPDC1BQ8WUY9 529 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 AFG1LQ8WV93 481 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 ADAM22Q9P0K1 906 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 CPDO75976 1380 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 CLNS1AP54105 237 aaKnown RBP16.11■□□□□ 0.17
UBE3B-202ENST00000342494 UNC13DQ70J99 1090 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 PDCD6IPQ8WUM4 868 aaKnown RBP16.11■□□□□ 0.17
UBE3B-202ENST00000342494 GNGT2O14610 69 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 HIP1RO75146 1068 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 KLC3Q6P597 504 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 TBC1D10CQ8IV04 446 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 Q9H521 79 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 NEDD4P46934 1319 aa16.11■□□□□ 0.17
UBE3B-202ENST00000342494 QARSP47897 775 aaKnown RBP16.11■□□□□ 0.17
UBE3B-202ENST00000342494 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
UBE3B-202ENST00000342494 P4HBP07237 508 aaKnown RBP16.1■□□□□ 0.17
UBE3B-202ENST00000342494 CHRNA5P30532 468 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 CXCR5P32302 372 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 DACT3Q96B18 629 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-202ENST00000342494 SPDL1Q96EA4 605 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 KCTD16Q68DU8 428 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 PDIK1LQ8N165 341 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 ZNF668Q96K58 619 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-202ENST00000342494 SPTLC3Q9NUV7 552 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 MID2Q9UJV3 735 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 A0A087WWV3 80 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 TTI1O43156 1089 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 NMT2O60551 498 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 CHEK2O96017 543 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 HMGCS2P54868 508 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 RWDD2BP57060 319 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 ALKBH5Q6P6C2 394 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms