RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 DHX9Q08211 1270 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 PPP2R5AQ15172 486 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 ASIC2Q16515 512 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 SFMBT2Q5VUG0 894 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 B4GALNT4Q76KP1 1039 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 ASIC3Q9UHC3 531 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 NOVA2Q9UNW9 492 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 hCG_1984214I3L0E3 225 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 PCK1P35558 622 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 TRAPPC10P48553 1259 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 SNX1Q13596 522 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 CCDC105Q8IYK2 499 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 ZNF713Q8N859 430 aaPredicted RBP11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 LRRC1Q9BTT6 524 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 GCNT3O95395 438 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 FCER1AP12319 257 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 PLTPP55058 493 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 APBA1Q02410 837 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 PAK2Q13177 524 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 CALCRLQ16602 461 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 RESP18Q5W5W9 173 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 HIBCHQ6NVY1 386 aaPredicted RBP11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 BICD1Q96G01 975 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 ZMYND12Q9H0C1 365 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 ABHD10Q9NUJ1 306 aa11.4□□□□□ -0.58
CAPRIN1-201ENST00000341394 ADM5C9JUS6 153 aa11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 PTPREP23469 700 aa11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 HOXA13P31271 388 aaPredicted RBP11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 HP1BP3Q5SSJ5 553 aaPredicted RBP11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 ICE2Q659A1 982 aa11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 REXO1L1PQ8IX06 675 aa11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 FERMT2Q96AC1 680 aa11.4□□□□□ -0.59
CAPRIN1-201ENST00000341394 PLEKP08567 350 aaPredicted RBP11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 MYBL1P10243 752 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 ALAS1P13196 640 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 EPHX2P34913 555 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 SRLQ86TD4 932 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 LRRC15Q8TF66 581 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 GLT8D2Q9H1C3 349 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 CHORDC1Q9UHD1 332 aaPredicted RBP11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 GCKP35557 465 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 DNM2P50570 870 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 HMGCS2P54868 508 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 MTM1Q13496 603 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 TBC1D1Q86TI0 1168 aaPredicted RBP11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 C4orf32Q8N8J7 132 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 FAM13AO94988 1023 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 KRT5P13647 590 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 PLCG1P19174 1290 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 USP14P54578 494 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 PABPC4Q13310 644 aaKnown RBP eCLIP11.39□□□□□ -0.592e-26■□□□□ 10.8
CAPRIN1-201ENST00000341394 CCDC38Q502W7 563 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 VSIG1Q86XK7 387 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 DDX42Q86XP3 938 aaKnown RBP eCLIP11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 ARFGAP2Q8N6H7 521 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 CCPG1Q9ULG6 757 aa11.39□□□□□ -0.59
CAPRIN1-201ENST00000341394 TCP11X2Q5H9J9 407 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 CNNM4Q6P4Q7 775 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 FAM160B2Q86V87 743 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 SRPRBQ9Y5M8 271 aaKnown RBP11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 POTEMA6NI47 508 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 MYO1FO00160 1098 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 ZBED4O75132 1171 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 IFNB1P01574 187 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 TNFAIP3P21580 790 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 ZNF131P52739 623 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 HOOK3Q86VS8 718 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 SCYL3Q8IZE3 742 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 TRIM58Q8NG06 486 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 GDAP1Q8TB36 358 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 N4BP2L2Q92802 583 aaPredicted RBP11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 IQCA1LA6NCM1 817 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 PHF20L1A8MW92 1017 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 BMP6P22004 513 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 IREB2P48200 963 aaKnown RBP11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 ZNF211Q13398 564 aaPredicted RBP11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 ZNF280CQ8ND82 737 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 MED4Q9NPJ6 270 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 FEM1BQ9UK73 627 aa11.38□□□□□ -0.59
CAPRIN1-201ENST00000341394 CETN3O15182 167 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 TMCO4Q5TGY1 634 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 NSMFQ6X4W1 530 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 ARHGEF2Q92974 986 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 GSDMAQ96QA5 445 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 MYCBPQ99417 103 aaPredicted RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 SH2D3AQ9BRG2 576 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 DDX47Q9H0S4 455 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 UTP11Q9Y3A2 253 aaKnown RBP11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 H0Y3Z8 333 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 KIF11P52732 1056 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
CAPRIN1-201ENST00000341394 LRRC14Q15048 493 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms