RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 WNT10BO00744 389 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 ZMYND10O75800 440 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 PON1P27169 355 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 TNNT3P45378 269 aaPredicted RBP22.05■■□□□ 1.12
SPG7-202ENST00000341316 CXCL9Q07325 125 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 TEX2Q8IWB9 1127 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 MYCT1Q8N699 235 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 RPGRIP1Q96KN7 1286 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 OSBPL9Q96SU4 736 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 MED4Q9NPJ6 270 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 COL20A1Q9P218 1284 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 FEZ2Q9UHY8 353 aaPredicted RBP22.05■■□□□ 1.12
SPG7-202ENST00000341316 ZNF536O15090 1300 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 FAM13AO94988 1023 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 XRCC5P13010 732 aaKnown RBP22.05■■□□□ 1.12
SPG7-202ENST00000341316 PTGER2P43116 358 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 SLC18A3Q16572 532 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 B3GNT9Q6UX72 402 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 KCTD17Q8N5Z5 321 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 SLC35C1Q96A29 364 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 FIZ1Q96SL8 496 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 SMARCAL1Q9NZC9 954 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 ADAMTS1Q9UHI8 967 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 LCMT1Q9UIC8 334 aa22.05■■□□□ 1.12
SPG7-202ENST00000341316 AJAP1Q9UKB5 411 aaPredicted RBP22.05■■□□□ 1.12
SPG7-202ENST00000341316 PRLRP16471 622 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 GAP43P17677 238 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 MAP3K10Q02779 954 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 KLHL30Q0D2K2 578 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 EPHA7Q15375 998 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 ASIC2Q16515 512 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 KLHDC7AQ5VTJ3 777 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 DEFB132Q7Z7B7 95 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 AGBL3Q8NEM8 1001 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 ALS2CR12Q96Q35 445 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 TLR10Q9BXR5 811 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 PACSIN1Q9BY11 444 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 ZNF341Q9BYN7 854 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 PLCB1Q9NQ66 1216 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 EHD2Q9NZN4 543 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 PCDHB13Q9Y5F0 798 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 UCHL3P15374 230 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 ITGB5P18084 799 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 DGKZQ13574 1117 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 COG2Q14746 738 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 IRF2BP2Q7Z5L9 587 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 NIM1KQ8IY84 436 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 BORCS6Q96GS4 357 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.04■■□□□ 1.12
SPG7-202ENST00000341316 VIPAS39Q9H9C1 493 aa22.04■■□□□ 1.12
SPG7-202ENST00000341316 EXOC3L4Q17RC7 722 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 TCERG1LQ5VWI1 586 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 RBM46Q8TBY0 533 aaKnown RBP22.03■■□□□ 1.12
SPG7-202ENST00000341316 NOX5Q96PH1 765 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 FAM204AQ9H8W3 233 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 SIX2Q9NPC8 291 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 PHF20L1A8MW92 1017 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 IPO5O00410 1097 aaKnown RBP22.03■■□□□ 1.12
SPG7-202ENST00000341316 NFIBO00712 420 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 SLC16A3O15427 465 aaKnown RBP22.03■■□□□ 1.12
SPG7-202ENST00000341316 MCM3P25205 808 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 RPL13P26373 211 aaKnown RBP22.03■■□□□ 1.12
SPG7-202ENST00000341316 KLRC1P26715 233 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 PTK2Q05397 1052 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 MAP9Q49MG5 647 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 RNF10Q8N5U6 811 aaKnown RBP22.03■■□□□ 1.12
SPG7-202ENST00000341316 BANK1Q8NDB2 785 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 IL31RAQ8NI17 732 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 TSPYL1Q9H0U9 437 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 PARVGQ9HBI0 331 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 CCPG1Q9ULG6 757 aa22.03■■□□□ 1.12
SPG7-202ENST00000341316 FRMPD4Q14CM0 1322 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 TARSL2A2RTX5 802 aaKnown RBP22.02■■□□□ 1.12
SPG7-202ENST00000341316 RNF40O75150 1001 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 SYF2O95926 243 aaKnown RBP22.02■■□□□ 1.12
SPG7-202ENST00000341316 ASNSP08243 561 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 EPB41P11171 864 aaKnown RBP22.02■■□□□ 1.12
SPG7-202ENST00000341316 AARSP49588 968 aaKnown RBP eCLIP22.02■■□□□ 1.12
SPG7-202ENST00000341316 HSD17B4P51659 736 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 ZNF572Q7Z3I7 529 aaPredicted RBP22.02■■□□□ 1.12
SPG7-202ENST00000341316 MXRA8Q9BRK3 442 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 EHMT1Q9H9B1 1298 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 PKD2L1Q9P0L9 805 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 HPCAL4Q9UM19 191 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 HYOU1Q9Y4L1 999 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 MYH10P35580 1976 aa22.02■■□□□ 1.12
SPG7-202ENST00000341316 DDX39AO00148 427 aaKnown RBP22.01■■□□□ 1.11
SPG7-202ENST00000341316 EIF3DO15371 548 aaKnown RBP eCLIP22.01■■□□□ 1.11
SPG7-202ENST00000341316 EGFRP00533 1210 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 ICAM1P05362 532 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 NAB2Q15742 525 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 ZNF571Q7Z3V5 609 aaPredicted RBP22.01■■□□□ 1.11
SPG7-202ENST00000341316 GSPT2Q8IYD1 628 aaKnown RBP22.01■■□□□ 1.11
SPG7-202ENST00000341316 GDAP1L1Q96MZ0 367 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 HINFPQ9BQA5 517 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 LXNQ9BS40 222 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 WDR11Q9BZH6 1224 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 DEFB129Q9H1M3 183 aa22.01■■□□□ 1.11
SPG7-202ENST00000341316 METTL14Q9HCE5 456 aaKnown RBP22.01■■□□□ 1.11
SPG7-202ENST00000341316 MYBL2P10244 700 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms