RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ARHGEF16Q5VV41 709 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 DYMQ7RTS9 669 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 MCF2L2Q86YR7 1114 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 ZNF513Q8N8E2 541 aaPredicted RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 BLOC1S4Q9NUP1 217 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CPSF2Q9P2I0 782 aaKnown RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 AGTPBP1Q9UPW5 1226 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 TELO2Q9Y4R8 837 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 DNAH12Q6ZR08 3092 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CIITAP33076 1130 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 SARSP49591 514 aaKnown RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 FXR1P51114 621 aaKnown RBP eCLIP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 PSMC6P62333 389 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 GRM1Q13255 1194 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 PGM5Q15124 567 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 E2F5Q15329 346 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 Q4G0T1 1027 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CNMDO75829 334 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 PGK2P07205 417 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CYP3A4P08684 503 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 KRT79Q5XKE5 535 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 APTXQ7Z2E3 356 aaKnown RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 PROCA1Q8NCQ7 364 aaPredicted RBP16.56■□□□□ 0.24
BRAT1-201ENST00000340611 PXMP2Q9NR77 195 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 RBPJLQ9UBG7 517 aa16.56■□□□□ 0.24
BRAT1-201ENST00000340611 ASTN1O14525 1302 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CHUKO15111 745 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 ATP9AO75110 1047 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 HUNKP57058 714 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 AK8Q96MA6 479 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 ZNF577Q9BSK1 485 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
BRAT1-201ENST00000340611 SPATC1LQ9H0A9 340 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 LOC285556D6RIA3 1793 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CCL15-CCL14A0A0B4J2E2 113 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 MFAP3LO75121 409 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 SYF2O95926 243 aaKnown RBP16.55■□□□□ 0.24
BRAT1-201ENST00000340611 SNAPC2Q13487 334 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 CCL15Q16663 113 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 OTUD6BQ8N6M0 293 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 ZNF483Q8TF39 744 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-201ENST00000340611 BRI3BPQ8WY22 251 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 HINFPQ9BQA5 517 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 KCNH7Q9NS40 1196 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 GDAQ9Y2T3 454 aa16.55■□□□□ 0.24
BRAT1-201ENST00000340611 NPHP3-ACAD11A0A0J9YXS1 232 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 POTEB2H3BUK9 544 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 ERCC3P19447 782 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 HOXA7P31268 230 aaPredicted RBP16.54■□□□□ 0.24
BRAT1-201ENST00000340611 SP4Q02446 784 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 CTTNQ14247 550 aaKnown RBP16.54■□□□□ 0.24
BRAT1-201ENST00000340611 EEPD1Q7L9B9 569 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 KIAA1217Q5T5P2 1943 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 ENO4A6NNW6 628 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 BTBD19C9JJ37 291 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 IRAK1P51617 712 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 NT5DC1Q5TFE4 455 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 CATSPER3Q86XQ3 398 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 SH2D3AQ9BRG2 576 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 MXRA8Q9BRK3 442 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 LCTP09848 1927 aa16.54■□□□□ 0.24
BRAT1-201ENST00000340611 GYPCP04921 128 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 PSMD2Q13200 908 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 ORC2Q13416 577 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-201ENST00000340611 PDIA5Q14554 519 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 TKFCQ3LXA3 575 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 RNF187Q5TA31 235 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-201ENST00000340611 PIK3R5Q8WYR1 880 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 NAPGQ99747 312 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-201ENST00000340611 PTPN18Q99952 460 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 PORCNQ9H237 461 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 PDHXO00330 501 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 IPO5O00410 1097 aaKnown RBP16.53■□□□□ 0.24
BRAT1-201ENST00000340611 GAS7O60861 476 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 KIAA0754O94854 1291 aa16.53■□□□□ 0.24
BRAT1-201ENST00000340611 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-201ENST00000340611 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms