RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 GFPT2O94808 682 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 FAM193AP78312 1265 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 ASIC2Q16515 512 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 CLEC4DQ8WXI8 215 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 LPAR1Q92633 364 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 SECISBP2LQ93073 1101 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 FHOD1Q9Y613 1164 aa11.16□□□□□ -0.62
RBFOX1-202ENST00000340209 A0A1W2PQC6 194 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 TBX3O15119 743 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 FTCDO95954 541 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 PGK2P07205 417 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 DLATP10515 647 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 RPL13P26373 211 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 PPARDQ03181 441 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 PGM5Q15124 567 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 TREML2Q5T2D2 321 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 CCDC181Q5TID7 509 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 FKBP1CQ5VVH2 108 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 TMCO3Q6UWJ1 677 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 ST7Q9NRC1 585 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 ARGLU1Q9NWB6 273 aaPredicted RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 SIPA1L1O43166 1804 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 RPS12P25398 132 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 YWHABP31946 246 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 GPR162Q16538 588 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 PDCD2LQ9BRP1 358 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 GRM1Q13255 1194 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 VGLL4Q14135 290 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 TMEM132BQ14DG7 1078 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 LLGL1Q15334 1064 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 SLC9C1Q4G0N8 1177 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 GOLGA1Q92805 767 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 HSD17B14Q9BPX1 270 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 GBP3Q9H0R5 595 aa11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 CHORDC1Q9UHD1 332 aaPredicted RBP11.15□□□□□ -0.62
RBFOX1-202ENST00000340209 CTAGE15A4D2H0 777 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 TBC1D12O60347 775 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CTAGE8P0CG41 777 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CIITAP33076 1130 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 QARSP47897 775 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 GCLMP48507 274 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 SETQ01105 290 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 EPHA7Q15375 998 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 GLIPR1L2Q4G1C9 344 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CTAGE6Q86UF2 777 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 APOBEC3FQ8IUX4 373 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CTAGE4Q8IX94 777 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 SLC5A5Q92911 643 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 PACSIN1Q9BY11 444 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 LMNB1P20700 586 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CLCN6P51797 869 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 FSTL1Q12841 308 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 TAF3Q5VWG9 929 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CBWD1Q9BRT8 395 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 HYOU1Q9Y4L1 999 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 PCDHA13Q9Y5I0 950 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 QSER1Q2KHR3 1735 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 ARHGAP25P42331 645 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 MOXD1Q6UVY6 613 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 GSPT2Q8IYD1 628 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 DNAJC7Q99615 494 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 LARSQ9P2J5 1176 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 SIK3Q9Y2K2 1263 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 MRFAP1Q9Y605 127 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CAPN6Q9Y6Q1 641 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 TMEM110-MUSTN1A8MSY1 372 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 P4HBP07237 508 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 KRT13P13646 458 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 ZNF280AP59817 542 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 KIAA0753Q2KHM9 967 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 CRYGNQ8WXF5 182 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 POLR3CQ9BUI4 534 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 SUGCTQ9HAC7 445 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
RBFOX1-202ENST00000340209 ASTN1O14525 1302 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 HOXD13P35453 343 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 PDXDC1Q6P996 788 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 PHLDB2Q86SQ0 1253 aa11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 U2AF1L4Q8WU68 220 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-202ENST00000340209 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms