RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 TAS2R14Q9NYV8 317 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-202ENST00000339570 LEMD3Q9Y2U8 911 aa17.57■□□□□ 0.4
SCARB1-202ENST00000339570 FLOT1O75955 427 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 TM4SF1P30408 202 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 PHLDB2Q86SQ0 1253 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 CATSPER3Q86XQ3 398 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 SUGP1Q8IWZ8 645 aaKnown RBP17.56■□□□□ 0.4
SCARB1-202ENST00000339570 TCP11Q8WWU5 503 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.43e-8■■■□□ 15.6
SCARB1-202ENST00000339570 HSPA9P38646 679 aaKnown RBP17.56■□□□□ 0.4
SCARB1-202ENST00000339570 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCARB1-202ENST00000339570 PPP2R2AP63151 447 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 CACNA2D3Q8IZS8 1091 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 IQCDQ96DY2 449 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 KCTD10Q9H3F6 313 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 ARAP2Q8WZ64 1704 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 IGSF9BQ9UPX0 1349 aa17.56■□□□□ 0.4
SCARB1-202ENST00000339570 ATMINO43313 823 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PSMD2Q13200 908 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PPP1R7Q15435 360 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PAXIP1Q6ZW49 1069 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PALB2Q86YC2 1186 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PROM2Q8N271 834 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 DHX36Q9H2U1 1008 aaKnown RBP17.55■□□□□ 0.4
SCARB1-202ENST00000339570 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 DDX3XO00571 662 aaKnown RBP eCLIP17.55■□□□□ 0.43e-8■■■■□ 23.3
SCARB1-202ENST00000339570 CLTAP09496 248 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 FGFR4P22455 802 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PDIA5Q14554 519 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 TPH2Q8IWU9 490 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 LRRC27Q9C0I9 530 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 CXorf56Q9H5V9 222 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 RNF14Q9UBS8 474 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 MYH1P12882 1939 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 PNMA6FA0A0J9YX94 578 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 EVI5O60447 810 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 TBCAO75347 108 aaKnown RBP17.55■□□□□ 0.4
SCARB1-202ENST00000339570 VPS36Q86VN1 386 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 MYCT1Q8N699 235 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 ARFGAP2Q8N6H7 521 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 SLC35G2Q8TBE7 412 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 NUCKS1Q9H1E3 243 aaKnown RBP17.55■□□□□ 0.4
SCARB1-202ENST00000339570 ACP6Q9NPH0 428 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 AMFRQ9UKV5 643 aa17.55■□□□□ 0.4
SCARB1-202ENST00000339570 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 FMO2Q99518 471 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 AZI2Q9H6S1 392 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 DNM3Q9UQ16 869 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 RBAK-RBAKDNI3L0D1 243 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 NR3C1P04150 777 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 IFI35P80217 286 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 HIBCHQ6NVY1 386 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 CPNE8Q86YQ8 564 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 ZKSCAN4Q969J2 545 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 ARHGEF26Q96DR7 871 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 THOC1Q96FV9 657 aaKnown RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 ELAC2Q9BQ52 826 aaKnown RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 RUSC1Q9BVN2 902 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 MTFR1LQ9H019 292 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 PCIF1Q9H4Z3 704 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 PLCB1Q9NQ66 1216 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 G3V3G9 751 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 DDX39AO00148 427 aaKnown RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 CLSTN1O94985 981 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 KCNJ1P48048 391 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 RHBDL3P58872 404 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 DCAF8Q5TAQ9 597 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 ANO3Q9BYT9 981 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 NT5C3AQ9H0P0 336 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
SCARB1-202ENST00000339570 DBR1Q9UK59 544 aaKnown RBP17.54■□□□□ 0.4
SCARB1-202ENST00000339570 CDC25CP30307 473 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 MARCKSL1P49006 195 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 VPS41P49754 854 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 KNOP1Q1ED39 458 aaKnown RBP17.53■□□□□ 0.4
SCARB1-202ENST00000339570 RUFY4Q6ZNE9 571 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 N4BP2L2Q92802 583 aaPredicted RBP17.53■□□□□ 0.4
SCARB1-202ENST00000339570 C18orf8Q96DM3 657 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 BTBD6Q96KE9 485 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 CEP63Q96MT8 703 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 AIPL1Q9NZN9 384 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 GDF11O95390 407 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 PLCG2P16885 1265 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 TMC3Q7Z5M5 1100 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 TBC1D1Q86TI0 1168 aaPredicted RBP17.53■□□□□ 0.4
SCARB1-202ENST00000339570 ZFPM1Q8IX07 1006 aa17.53■□□□□ 0.4
SCARB1-202ENST00000339570 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms