RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 WDR93Q6P2C0 686 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TPH2Q8IWU9 490 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 DAW1Q8N136 415 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 GPC2Q8N158 579 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SLC35C1Q96A29 364 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 CAPZA3Q96KX2 299 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 STRA6Q9BX79 667 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 RRAGCQ9HB90 399 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 PLCB1Q9NQ66 1216 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 NENFQ9UMX5 172 aa14.27□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SLC16A3O15427 465 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 DHX15O43143 795 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 GAS7O60861 476 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 GCNT3O95395 438 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ICAM1P05362 532 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 GAP43P17677 238 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZC2HC1CQ53FD0 456 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 KLHDC7AQ5VTJ3 777 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 IRF2BP2Q7Z5L9 587 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 KSR1Q8IVT5 923 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ANKRD13CQ8N6S4 541 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MXRA8Q9BRK3 442 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ARMCX3Q9UH62 379 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
CDK5RAP1-201ENST00000339269 A0A087X0T9 212 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 CLIC2O15247 247 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 EIF3DO15371 548 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TBCAO75347 108 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 AFPP02771 609 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ASNSP08243 561 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 FAM228BP0C875 321 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MUTP22033 750 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZNF280AP59817 542 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 RASA3Q14644 834 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 COG2Q14746 738 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TNIP1Q15025 636 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 NFIL3Q16649 462 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZNF577Q9BSK1 485 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TLR10Q9BXR5 811 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 NUCKS1Q9H1E3 243 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MYOZ2Q9NPC6 264 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ASTN2O75129 1339 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 NCK2O43639 380 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 CALUO43852 315 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 USO1O60763 962 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TACC1O75410 805 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 PPP1R37O75864 691 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 UCHL3P15374 230 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 PRLRP16471 622 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SPP2Q13103 211 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ITGB3BPQ13352 177 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SLC9C1Q4G0N8 1177 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 TDRD12Q587J7 1177 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 DMAC2Q9NW81 257 aa14.25□□□□□ -0.13
CDK5RAP1-201ENST00000339269 IPO5O00410 1097 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 BCRP11274 1271 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 JAM2P57087 298 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SETQ01105 290 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 RAPGEF1Q13905 1077 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SMC1AQ14683 1233 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MUM1L1Q5H9M0 696 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZNF720Q7Z2F6 126 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZNF571Q7Z3V5 609 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MSL3Q8N5Y2 521 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 DRC1Q96MC2 740 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 RIT2Q99578 217 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 LXNQ9BS40 222 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 WDR11Q9BZH6 1224 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 SMARCAL1Q9NZC9 954 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 CCPG1Q9ULG6 757 aa14.24□□□□□ -0.13
CDK5RAP1-201ENST00000339269 FAM13AO94988 1023 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 GUCY2CP25092 1073 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 CKAP4Q07065 602 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 C2orf54Q08AI8 447 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 NAB2Q15742 525 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ASIC2Q16515 512 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MYCT1Q8N699 235 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 OSBPL9Q96SU4 736 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 PARVGQ9HBI0 331 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 ZCCHC17Q9NP64 241 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 EHD2Q9NZN4 543 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 UBIAD1Q9Y5Z9 338 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 BUB1O43683 1085 aa14.23□□□□□ -0.13
CDK5RAP1-201ENST00000339269 MYBL2P10244 700 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms