RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SCN4AP35499 1836 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 SPATA31C2B4DYI2 1134 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 PDXKO00764 312 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 LYPLA2O95372 231 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 GNPTABQ3T906 1256 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 GPAT2Q6NUI2 795 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 DNERQ8NFT8 737 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 CHP1Q99653 195 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 JPH1Q9HDC5 661 aaPredicted RBP24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 DOCK5Q9H7D0 1870 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 PFASO15067 1338 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 A0A0G2JMZ2 1700 aa24.72■■□□□ 1.55
PDLIM2-203ENST00000339162 SOWAHBA6NEL2 793 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 POTEB2H3BUK9 544 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 EPHB6O15197 1021 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 TGFB1I1O43294 461 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 IWS1Q96ST2 819 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 MMRN2Q9H8L6 949 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 TYW1Q9NV66 732 aaKnown RBP24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 SIK3Q9Y2K2 1263 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 CALUO43852 315 aaPredicted RBP24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 PGK2P07205 417 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 XKR9Q5GH70 373 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 SWSAP1Q6NVH7 229 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 ZC3H3Q8IXZ2 948 aaKnown RBP24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 OR8K1Q8NGG5 319 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 GPRC5CQ9NQ84 441 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 SLC9A2Q9UBY0 812 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 ZMYM2Q9UBW7 1377 aa24.71■■□□□ 1.55
PDLIM2-203ENST00000339162 A0A0U1RQJ8 604 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 ZSCAN12O43309 604 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 NR3C1P04150 777 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 ANO5Q75V66 913 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 FASTKD5Q7L8L6 764 aaKnown RBP24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 EEPD1Q7L9B9 569 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 TRIM59Q8IWR1 403 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 ATRIPQ8WXE1 791 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 CDHR1Q96JP9 859 aa24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.7■■□□□ 1.55
PDLIM2-203ENST00000339162 UQCRHLA0A096LP55 91 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 ZNF862O60290 1169 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 EIF3JO75822 258 aaKnown RBP24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 GNA14O95837 355 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 UQCRHP07919 91 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 CYP2C8P10632 490 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 FECHP22830 423 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 CASP4P49662 377 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 CYFIP1Q7L576 1253 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 PRIMPOLQ96LW4 560 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 SEL1LQ9UBV2 794 aa24.7■■□□□ 1.54
PDLIM2-203ENST00000339162 EIF3DO15371 548 aaKnown RBP eCLIP24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 CCP110O43303 1012 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 STAM2O75886 525 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 AKAP3O75969 853 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 ACTR2P61160 394 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 WDR78Q5VTH9 848 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 SYT10Q6XYQ8 523 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 DNAJC7Q99615 494 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 SENP7Q9BQF6 1050 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 NUP58Q9BVL2 599 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 RIOK3O14730 519 aaKnown RBP24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 WDR59Q6PJI9 974 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 CYP26C1Q6V0L0 522 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 TMTC1Q8IUR5 882 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 CCDC60Q8IWA6 550 aaPredicted RBP24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 CRACR2AQ9BSW2 395 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 ADGRG1Q9Y653 693 aa24.69■■□□□ 1.54
PDLIM2-203ENST00000339162 OSBPP22059 807 aa24.68■■□□□ 1.54
PDLIM2-203ENST00000339162 MARSP56192 900 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-203ENST00000339162 SNAPC2Q13487 334 aa24.68■■□□□ 1.54
PDLIM2-203ENST00000339162 GPIHBP1Q8IV16 184 aa24.68■■□□□ 1.54
PDLIM2-203ENST00000339162 ACRBPQ8NEB7 543 aa24.68■■□□□ 1.54
PDLIM2-203ENST00000339162 K7ENM7 598 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 KCNMA1Q12791 1236 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 SMAP1Q8IYB5 467 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 RETREG2Q8NC44 543 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 ZNF526Q8TF50 670 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 PCDHB13Q9Y5F0 798 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 MYH11P35749 1972 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 NFASCO94856 1347 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 PSAPP07602 524 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 CCDC175P0C221 793 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 FAM133AQ8N9E0 248 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 RDM1Q8NG50 284 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 MAF1Q9H063 256 aa24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 LARSQ9P2J5 1176 aaKnown RBP24.67■■□□□ 1.54
PDLIM2-203ENST00000339162 SOX10P56693 466 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 APBA1Q02410 837 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 FAM102BQ5T8I3 360 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 RRAGCQ9HB90 399 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 ARMCX3Q9UH62 379 aaPredicted RBP24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 TERF1P54274 439 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 ZBED6P86452 979 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 TSR1Q2NL82 804 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 TRIM65Q6PJ69 517 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 ABHD15Q6UXT9 468 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 ANKEF1Q9NU02 776 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 LOXHD1Q8IVV2 1947 aa24.66■■□□□ 1.54
PDLIM2-203ENST00000339162 RPL13P26373 211 aaKnown RBP24.65■■□□□ 1.54
PDLIM2-203ENST00000339162 KCNH2Q12809 1159 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms