RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 ABHD15Q6UXT9 468 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 PLA2G4DQ86XP0 818 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 RNF135Q8IUD6 432 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 CCDC12Q8WUD4 166 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-202ENST00000338995 LINC01599Q8WXQ3 324 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 RGS18Q9NS28 235 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 TBC1D22BQ9NU19 505 aa16.16■□□□□ 0.18
COMMD4-202ENST00000338995 PUF60Q9UHX1 559 aaKnown RBP16.16■□□□□ 0.18
COMMD4-202ENST00000338995 IGKV6D-21A0A0A0MT36 114 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 DDX39AO00148 427 aaKnown RBP16.15■□□□□ 0.18
COMMD4-202ENST00000338995 SRGAP2BP0DMP2 458 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 GTF2F1P35269 517 aaKnown RBP eCLIP16.15■□□□□ 0.184e-9■■■■■ 28.7
COMMD4-202ENST00000338995 NRIP1P48552 1158 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 CRYBB1P53674 252 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-202ENST00000338995 COASYQ13057 564 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-202ENST00000338995 CAMK1Q14012 370 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 TMEM266Q2M3C6 531 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 SWSAP1Q6NVH7 229 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 PGBD1Q96JS3 809 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 ADAM2Q99965 735 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 ATP6V0A4Q9HBG4 840 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-202ENST00000338995 ST3GAL5Q9UNP4 418 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 CEP131Q9UPN4 1083 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
COMMD4-202ENST00000338995 MUC6Q6W4X9 2439 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 TBKBP1A7MCY6 615 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 IPO5O00410 1097 aaKnown RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 MAGEB2O15479 319 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 LINC01565O15544 149 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 TBX10O75333 385 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 TMOD1P28289 359 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 RCAN1P53805 252 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 IRX6P78412 446 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 TSGA10IPQ3SY00 556 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 RBM23Q86U06 439 aaKnown RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 ALYREFQ86V81 257 aaKnown RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 METTL13Q8N6R0 699 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 BBXQ8WY36 941 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 EDAQ92838 391 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 MSLNLQ96KJ4 702 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 CDCA3Q99618 268 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 ZNF577Q9BSK1 485 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 TMX1Q9H3N1 280 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 ERVK-5Q9HDB9 667 aa16.14■□□□□ 0.17
COMMD4-202ENST00000338995 NOC2LQ9Y3T9 749 aaKnown RBP16.14■□□□□ 0.17
COMMD4-202ENST00000338995 HOXA2O43364 376 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 PSAPP07602 524 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 CYP3A4P08684 503 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 ZSCAN20P17040 1043 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-202ENST00000338995 DNAJB1P25685 340 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 GNA11P29992 359 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-202ENST00000338995 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
COMMD4-202ENST00000338995 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 ZNF746Q6NUN9 644 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-202ENST00000338995 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-202ENST00000338995 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 ELAC1Q9H777 363 aaKnown RBP16.13■□□□□ 0.17
COMMD4-202ENST00000338995 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 MUTYHQ9UIF7 546 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 PCDHA10Q9Y5I2 948 aa16.13■□□□□ 0.17
COMMD4-202ENST00000338995 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 CCNE2O96020 404 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 LAG3P18627 525 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 CLK2P49760 499 aaKnown RBP16.12■□□□□ 0.17
COMMD4-202ENST00000338995 FAM189BP81408 668 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 FUT2Q10981 343 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 TYW1BQ6NUM6 668 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 ADGRD2Q7Z7M1 963 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 ABI1Q8IZP0 508 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 SMRP1Q8NCR6 262 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 MAP7D2Q96T17 732 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 PRRX2Q99811 253 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 NRBP2Q9NSY0 501 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 TYW1Q9NV66 732 aaKnown RBP16.12■□□□□ 0.17
COMMD4-202ENST00000338995 TMEM161AQ9NX61 479 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 CLEC1BQ9P126 229 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 SAMM50Q9Y512 469 aa16.12■□□□□ 0.17
COMMD4-202ENST00000338995 C9IYK1 514 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 FGF18O76093 207 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 GATMP50440 423 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 KRT17Q04695 432 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 BMS1Q14692 1282 aaKnown RBP16.11■□□□□ 0.17
COMMD4-202ENST00000338995 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-202ENST00000338995 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
COMMD4-202ENST00000338995 HFE2Q6ZVN8 426 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms