RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 CHP1Q99653 195 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 RUSC1Q9BVN2 902 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 R3HDMLQ9H3Y0 253 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 AGPAT5Q9NUQ2 364 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
LRP1-202ENST00000338962 EPN1Q9Y6I3 576 aaPredicted RBP12.22□□□□□ -0.45
LRP1-202ENST00000338962 PCNTO95613 3336 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 FANCGO15287 622 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 NDUFA10O95299 355 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 ITGB5P18084 799 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 MUTP22033 750 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 ERVK-9P63128 1117 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 EDRF1Q3B7T1 1238 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 WDR24Q96S15 920 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 UNC45AQ9H3U1 944 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 KCNH7Q9NS40 1196 aa12.22□□□□□ -0.45
LRP1-202ENST00000338962 GAP43P17677 238 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 CASP5P51878 434 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
LRP1-202ENST00000338962 EPHA7Q15375 998 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 MEA1Q16626 185 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 MUM1L1Q5H9M0 696 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 RIOX2Q8IUF8 465 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 SAMD3Q8N6K7 520 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 SYTL5Q8TDW5 730 aaPredicted RBP12.21□□□□□ -0.45
LRP1-202ENST00000338962 NACC1Q96RE7 527 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
LRP1-202ENST00000338962 FAM207AQ9NSI2 230 aaPredicted RBP12.21□□□□□ -0.45
LRP1-202ENST00000338962 RLFQ13129 1914 aa12.21□□□□□ -0.46
LRP1-202ENST00000338962 RSPH10B2B2RC85 870 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 CETN3O15182 167 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 IPO7O95373 1038 aaKnown RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 TBC1D8O95759 1140 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 RSPH10BP0C881 870 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 NR2F2P24468 414 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 ADAM9Q13443 819 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 KNOP1Q1ED39 458 aaKnown RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 TAF3Q5VWG9 929 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 WDR59Q6PJI9 974 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 NIPA1Q7RTP0 329 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 IL31RAQ8NI17 732 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 LXNQ9BS40 222 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 OLFML3Q9NRN5 406 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 PKD2L1Q9P0L9 805 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 SIK3Q9Y2K2 1263 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 PEX10O60683 326 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 FAM13AO94988 1023 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 GCNT3O95395 438 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 MARSP56192 900 aaKnown RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 MTMR1Q13613 665 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 RNF207Q6ZRF8 634 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 EPM2AIP1Q7L775 607 aaPredicted RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 SHCBP1Q8NEM2 672 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 NEK9Q8TD19 979 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 MOV10L1Q9BXT6 1211 aaKnown RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 IRX2Q9BZI1 471 aaPredicted RBP12.2□□□□□ -0.46
LRP1-202ENST00000338962 KCND2Q9NZV8 630 aa12.2□□□□□ -0.46
LRP1-202ENST00000338962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
LRP1-202ENST00000338962 A0A0U1RQJ8 604 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 SLC25A27O95847 323 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 MYBP10242 640 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 COPB2P35606 906 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 CCNA1P78396 465 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 NSMFQ6X4W1 530 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.19□□□□□ -0.46
LRP1-202ENST00000338962 MIER3Q7Z3K6 550 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 BANK1Q8NDB2 785 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 ATRIPQ8WXE1 791 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 ARID3AQ99856 593 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 MAF1Q9H063 256 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 PARVGQ9HBI0 331 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 10.1
LRP1-202ENST00000338962 TRAF3IP3Q9Y228 551 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 RIPK3Q9Y572 518 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 V9GYY5 206 aaPredicted RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 FRMPD4Q14CM0 1322 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 PDXKO00764 312 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 ZBTB39O15060 712 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 CALUO43852 315 aaPredicted RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms