RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GUCA1BQ9UMX6 200 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 SNX12Q9UMY4 172 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
RTN3-201ENST00000338850 MYH10P35580 1976 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 FRMD3A2A2Y4 597 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 A6NNZ2 444 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 TTLL1O95922 423 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 HMGCRP04035 888 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 ATP1A1P05023 1023 aaKnown RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 CAPN2P17655 700 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 NNTQ13423 1086 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 ASTE1Q2TB18 679 aaPredicted RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 TUBB8Q3ZCM7 444 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 GLE1Q53GS7 698 aaKnown RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 NOA1Q8NC60 698 aaKnown RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 ACER1Q8TDN7 264 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 DPF3Q92784 378 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 CDK5RAP3Q96JB5 506 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 PIGSQ96S52 555 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 HTATIP2Q9BUP3 242 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.51
RTN3-201ENST00000338850 EPC1Q9H2F5 836 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 AGPAT5Q9NUQ2 364 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 CEP72Q9P209 647 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 SYNPO2Q9UMS6 1093 aa11.88□□□□□ -0.51
RTN3-201ENST00000338850 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
RTN3-201ENST00000338850 CYP3A7-CYP3A51PA0A087WV96 503 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 MYMKA6NI61 221 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 BTNL10A8MVZ5 291 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 CES2O00748 559 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 TBX3O15119 743 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 TFRCP02786 760 aaKnown RBP11.87□□□□□ -0.51
RTN3-201ENST00000338850 CYP3A7P24462 503 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 ACTN2P35609 894 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 MRPL12P52815 198 aaKnown RBP11.87□□□□□ -0.51
RTN3-201ENST00000338850 ERVK-9P63128 1117 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 FKBP3Q00688 224 aaKnown RBP11.87□□□□□ -0.51
RTN3-201ENST00000338850 TRIM32Q13049 653 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
RTN3-201ENST00000338850 EDRF1Q3B7T1 1238 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 Q3C1V9 767 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 EIF1ADQ8N9N8 165 aaKnown RBP11.87□□□□□ -0.51
RTN3-201ENST00000338850 COG1Q8WTW3 980 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
RTN3-201ENST00000338850 BAP1Q92560 729 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 CUL5Q93034 780 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 MAPK8IP1Q9UQF2 711 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 DAAM1Q9Y4D1 1078 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
RTN3-201ENST00000338850 TRIOBPQ9H2D6 2365 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 GRID2IPA4D2P6 1211 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 EDIL3O43854 480 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 ABL1P00519 1130 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 FCER1AP12319 257 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 VCAM1P19320 739 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 CYP2B6P20813 491 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 MAPK4P31152 587 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 TECP42680 631 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP11P51784 963 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 KIF11P52732 1056 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 C10orf76Q5T2E6 689 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 NCAPH2Q6IBW4 605 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
RTN3-201ENST00000338850 SOCS4Q8WXH5 440 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 TRIB2Q92519 343 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 USP6NLQ92738 828 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 DNAJC19Q96DA6 116 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 PAGR1Q9BTK6 254 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
RTN3-201ENST00000338850 LACRTQ9GZZ8 138 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 PORCNQ9H237 461 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 PDE11AQ9HCR9 933 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 ARHGAP20Q9P2F6 1191 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
RTN3-201ENST00000338850 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms