RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
SHANK2-201ENST00000338508 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
SHANK2-201ENST00000338508 ARHGEF37A1IGU5 675 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 DFFAO00273 331 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 PJA2O43164 708 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SKOR1P84550 965 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SAYSD1Q9NPB0 183 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 PCDHA5Q9Y5H7 936 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SUPT3HB4E1H0 165 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 CA4P22748 312 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 ARL4DP49703 201 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 CACNB3P54284 484 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 TTC23LQ6PF05 361 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SLC13A1Q9BZW2 595 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 GAP43P17677 238 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 NBPF20Q3BBV1 942 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 GRAMD4Q6IC98 578 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 ZNF263O14978 683 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 DDIASQ8IXT1 998 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SP110Q9HB58 689 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 IQANK1A0A1B0GTG1 560 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 VCAM1P19320 739 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 TTLL11Q8NHH1 800 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 VPS39Q96JC1 886 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 HAUS4Q9H6D7 363 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 TMEM206Q9H813 350 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 ADCY9O60503 1353 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SOS2Q07890 1332 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 TADA3O75528 432 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 TSPY1Q01534 308 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 GABPB1Q06547 395 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
SHANK2-201ENST00000338508 C6orf203Q9P0P8 240 aaPredicted RBP12.6□□□□□ -0.39
SHANK2-201ENST00000338508 PGRMC1O00264 195 aaKnown RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 DIAPH2O60879 1101 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 PSMC5P62195 406 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 PATL1Q86TB9 770 aaKnown RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 RASSF3Q86WH2 238 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 P2RX5Q93086 422 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 ZNF212Q9UDV6 495 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 ANGPTL2Q9UKU9 493 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 MXI1P50539 228 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 ANGPT1Q15389 498 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 TXLNGQ9NUQ3 528 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 XDHP47989 1333 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 EFCAB14O75071 495 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 UPP2O95045 317 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 GALNT17Q6IS24 598 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 CENPUQ71F23 418 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 RHPN2Q8IUC4 686 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 MRFAP1L1Q96HT8 127 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 MAN1A2O60476 641 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SERPINI2O75830 405 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 PLA2G4BP0C869 781 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 C11orf96Q7Z7L8 435 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 STX18Q9P2W9 335 aaKnown RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 JRKLQ9Y4A0 524 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 KRT14P02533 472 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 ERFP50548 548 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 DR1Q01658 176 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 LRRC31Q6UY01 552 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SLC17A8Q8NDX2 589 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 MAP10Q9P2G4 905 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 TRAPPC8Q9Y2L5 1435 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 hCG_2014768A0A024R1R8 64 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 PRKAB2O43741 272 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SEC24DO94855 1032 aaPredicted RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SERPINB2P05120 415 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 PDHA1P08559 390 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 FAM117BQ6P1L5 589 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 RUBCNLQ9H714 662 aa12.59□□□□□ -0.39
SHANK2-201ENST00000338508 SAMSN1Q9NSI8 373 aaKnown RBP12.59□□□□□ -0.39
SHANK2-201ENST00000338508 ERBB3P21860 1342 aa12.58□□□□□ -0.39
SHANK2-201ENST00000338508 SPAG7O75391 227 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 ADORA2BP29275 332 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms