RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 COL1A2P08123 1366 aa17.22■□□□□ 0.35
PRKN-201ENST00000338468 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 EML1O00423 815 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 ST18O60284 1047 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 STBD1O95210 358 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 KLRC1P26715 233 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 HMGN5P82970 282 aaKnown RBP17.21■□□□□ 0.35
PRKN-201ENST00000338468 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 MIER3Q7Z3K6 550 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 TMCO2Q7Z6W1 182 aaPredicted RBP17.21■□□□□ 0.35
PRKN-201ENST00000338468 HERC6Q8IVU3 1022 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 FBXO18Q8NFZ0 1043 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 RDM1Q8NG50 284 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 FAM20AQ96MK3 541 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
PRKN-201ENST00000338468 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 XIRP2A4UGR9 3374 aa17.21■□□□□ 0.35
PRKN-201ENST00000338468 TBX3O15119 743 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 C22orf31O95567 290 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 MRPS6P82932 125 aaKnown RBP17.2■□□□□ 0.34
PRKN-201ENST00000338468 PRKCEQ02156 737 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 PPP2R5CQ13362 524 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 LPIN1Q14693 890 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 AAK1Q2M2I8 961 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKN-201ENST00000338468 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
PRKN-201ENST00000338468 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 KIAA0319LQ8IZA0 1049 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 NAP1L4Q99733 375 aaKnown RBP17.2■□□□□ 0.34
PRKN-201ENST00000338468 C1QTNF1Q9BXJ1 281 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 PCDHA11Q9Y5I1 949 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 MICAL3Q7RTP6 2002 aa17.2■□□□□ 0.34
PRKN-201ENST00000338468 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 OATP04181 439 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 GHRP10912 638 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 SPIRE1Q08AE8 756 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 TMEM62Q0P6H9 643 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 IKBKEQ14164 716 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 FBXO47Q5MNV8 452 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 RSPH3Q86UC2 560 aa17.19■□□□□ 0.34
PRKN-201ENST00000338468 KIF28PB7ZC32 967 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 RPLP2P05387 115 aaKnown RBP17.18■□□□□ 0.34
PRKN-201ENST00000338468 KCNJ6P48051 423 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 TARBP2Q15633 366 aaKnown RBP17.18■□□□□ 0.34
PRKN-201ENST00000338468 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 FAM184AQ8NB25 1140 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 SEPT8Q92599 483 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 FAM167AQ96KS9 214 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 CEP89Q96ST8 783 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
PRKN-201ENST00000338468 TRPV2Q9Y5S1 764 aa17.18■□□□□ 0.34
PRKN-201ENST00000338468 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 TMEM150BA6NC51 233 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 EFCAB14O75071 495 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 SAFBQ15424 915 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRKN-201ENST00000338468 SKIV2LQ15477 1246 aaKnown RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 IER5Q5VY09 327 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 NME8Q8N427 588 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 BANK1Q8NDB2 785 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 EVPLQ92817 2033 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 NECAB3Q96P71 396 aaPredicted RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 CELF4Q9BZC1 486 aaKnown RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 FOXP1Q9H334 677 aaPredicted RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 CDHR5Q9HBB8 845 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 WRAP73Q9P2S5 460 aaPredicted RBP17.17■□□□□ 0.34
PRKN-201ENST00000338468 KDM3AQ9Y4C1 1321 aa17.17■□□□□ 0.34
PRKN-201ENST00000338468 REV3LO60673 3130 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 CA3P07451 260 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 MCM2P49736 904 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 TFF2Q03403 129 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 TSHZ1Q6ZSZ6 1077 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 APBB2Q92870 758 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 NIFKQ9BYG3 293 aaKnown RBP17.16■□□□□ 0.34
PRKN-201ENST00000338468 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 NRBP2Q9NSY0 501 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
PRKN-201ENST00000338468 LOXHD1Q8IVV2 1947 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 TRANK1O15050 2925 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 LCHNA4D1U4 455 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 GTPBP6O43824 516 aaPredicted RBP17.15■□□□□ 0.34
PRKN-201ENST00000338468 NEMFO60524 1076 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 GJB5O95377 273 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 BMP1P13497 986 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 CD52P31358 61 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 CLCN3P51790 818 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 PSMC5P62195 406 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 EPHA7Q15375 998 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 CALCRLQ16602 461 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 XKR3Q5GH77 459 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 ANO5Q75V66 913 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 SPRED2Q7Z698 418 aa17.15■□□□□ 0.34
PRKN-201ENST00000338468 SLFN12Q8IYM2 578 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms