RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 LMTK2Q8IWU2 1503 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 LMNB1P20700 586 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 EPHB1P54762 984 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 RPS8P62241 208 aaKnown RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 SPARCL1Q14515 664 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 MAP7D1Q3KQU3 841 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 JDP2Q8WYK2 163 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 DNAJC7Q99615 494 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 METTL5Q9NRN9 209 aaKnown RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 DDAH1O94760 285 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 LDHBP07195 334 aaKnown RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 HSP90AA5PQ58FG0 334 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 GLYCTKQ8IVS8 523 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 TBC1D22AQ8WUA7 517 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 PPARGC1AQ9UBK2 798 aaKnown RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ADAMTS13Q76LX8 1427 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 CIAO1O76071 339 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 MX2P20592 715 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 LRRC63Q05C16 580 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 KCNH2Q12809 1159 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ANKRD20A2Q5SQ80 823 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ANKRD20A1Q5TYW2 823 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ENAHQ8N8S7 591 aaPredicted RBP14.26□□□□□ -0.13
COL2A1-201ENST00000337299 RUBCNQ92622 972 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 CCDC127Q96BQ5 260 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ZNF653Q96CK0 615 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 HEMGNQ9BXL5 484 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 SLITRK6Q9H5Y7 841 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 ARHGAP20Q9P2F6 1191 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 HAO1Q9UJM8 370 aa14.26□□□□□ -0.13
COL2A1-201ENST00000337299 QRICH2Q9H0J4 1663 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 FANCGO15287 622 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 HAUS5O94927 633 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 ACTN1P12814 892 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 KCNJ2P63252 427 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 IRX4P78413 519 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 KIF22Q14807 665 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 TRADDQ15628 312 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 MDH1BQ5I0G3 518 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 EPS8L3Q8TE67 593 aaKnown RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 CAVIN3Q969G5 261 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 CCDC124Q96CT7 223 aaKnown RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 HIC2Q96JB3 615 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 CPS1P31327 1500 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 UFL1O94874 794 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 MYL1P05976 194 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 RASGRF1Q13972 1273 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 TPH2Q8IWU9 490 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 SPZ1Q9BXG8 430 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 ABCF3Q9NUQ8 709 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 TTC7AQ9ULT0 858 aaPredicted RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 SERPINB3P29508 390 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 KCNJ1P48048 391 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 PMS1P54277 932 aaKnown RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 C1orf146Q5VVC0 180 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 MIER3Q7Z3K6 550 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 ZNF513Q8N8E2 541 aaPredicted RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
COL2A1-201ENST00000337299 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
COL2A1-201ENST00000337299 AGPSO00116 658 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 SLC18A3Q16572 532 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 QPCTQ16769 361 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 CCDC137Q6PK04 289 aaKnown RBP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 BZW1Q7L1Q6 419 aaKnown RBP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 MAP7D3Q8IWC1 876 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 CCDC89Q8N998 374 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 PRPF31Q8WWY3 499 aaKnown RBP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 AK8Q96MA6 479 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 NUF2Q9BZD4 464 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 KDM4CQ9H3R0 1056 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 A0A087X0T9 212 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 DDX39AO00148 427 aaKnown RBP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 ORC4O43929 436 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 LMNAP02545 664 aaKnown RBP14.24□□□□□ -0.13
COL2A1-201ENST00000337299 FAM228BP0C875 321 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 AMPD2Q01433 879 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 DNAJC3Q13217 504 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 ATG9AQ7Z3C6 839 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 ERICH1Q86X53 443 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 TRIM9Q9C026 710 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 BCS1LQ9Y276 419 aa14.24□□□□□ -0.13
COL2A1-201ENST00000337299 CPDO75976 1380 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms