RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 FLT1P17948 1338 aa12.08□□□□□ -0.47
CCDC87-201ENST00000333861 TNNC1P63316 161 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 UBE2SQ16763 222 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 TBCKQ8TEA7 893 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 MRRFQ96E11 262 aaKnown RBP12.08□□□□□ -0.48
CCDC87-201ENST00000333861 ZNF317Q96PQ6 595 aaPredicted RBP12.08□□□□□ -0.48
CCDC87-201ENST00000333861 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 FAM129AQ9BZQ8 928 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 ERVK-5Q9HDB9 667 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 ANKRD33BA6NCL7 494 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 E9PMD0 336 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 PDE8AO60658 829 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 POLE2P56282 527 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 RNF220Q5VTB9 566 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 FGFR1OP2Q9NVK5 253 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 ZFATQ9P243 1243 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
CCDC87-201ENST00000333861 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.08□□□□□ -0.48
CCDC87-201ENST00000333861 MEIS1O00470 390 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 PAPOLAP51003 745 aaKnown RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 MXRA7P84157 204 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 ZNF571Q7Z3V5 609 aaPredicted RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 DDX12PQ92771 950 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 LRRC45Q96CN5 670 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 ADAM22Q9P0K1 906 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 CTNNAL1Q9UBT7 734 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 SFI1A8K8P3 1242 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 F8VZ95 297 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 CLIC2O15247 247 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 PCK1P35558 622 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 SESN3P58005 492 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 GRB10Q13322 594 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 GRIK5Q16478 980 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 ASTE1Q2TB18 679 aaPredicted RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 SLC9C1Q4G0N8 1177 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 TBC1D10BQ4KMP7 808 aaPredicted RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 MEI1Q5TIA1 1274 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 TXNRD3Q86VQ6 643 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 FBXO41Q8TF61 875 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 DHTKD1Q96HY7 919 aaPredicted RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 CDK5RAP3Q96JB5 506 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 SYT15Q9BQS2 421 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 INTS9Q9NV88 658 aaKnown RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 RGS17Q9UGC6 210 aaPredicted RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 SRP68Q9UHB9 627 aaKnown RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 SMCO2A6NFE2 343 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 FGGP02679 453 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 STAT3P40763 770 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 BLMHQ13867 455 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 U2AF1L4Q8WU68 220 aaKnown RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 FAM118BQ9BPY3 351 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
CCDC87-201ENST00000333861 CORO1CQ9ULV4 474 aaPredicted RBP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 NIP7Q9Y221 180 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC87-201ENST00000333861 LRRN2O75325 713 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 GHRP10912 638 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 KRT13P13646 458 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 ATP2A2P16615 1042 aaKnown RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 EPS15P42566 896 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 KCNJ1P48048 391 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 BIRC3Q13489 604 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 MAN2A1Q16706 1144 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 TBC1D25Q3MII6 688 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 ZC3H12AQ5D1E8 599 aaKnown RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 NAF1Q96HR8 494 aaKnown RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 PIGSQ96S52 555 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 TAF1P21675 1872 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 MARCH6O60337 910 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 OR52Z1P0C646 297 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 NEFHP12036 1026 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 MECOMQ03112 1051 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 ZNF268Q14587 947 aaPredicted RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 TRIP13Q15645 432 aaPredicted RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 PRUNE1Q86TP1 453 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 DYDC1Q8WWB3 177 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 ATXN2LQ8WWM7 1075 aaKnown RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 TMEM237Q96Q45 408 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 PAIP2Q9BPZ3 127 aaKnown RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 ADAM7Q9H2U9 754 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 MKNK2Q9HBH9 465 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 KCNMB3Q9NPA1 279 aa12.06□□□□□ -0.48
CCDC87-201ENST00000333861 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
CCDC87-201ENST00000333861 COL4A1P02462 1669 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms