RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 KRT14P02533 472 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 MMP10P09238 476 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ATP1A2P50993 1020 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 IRAK1P51617 712 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CTNNBL1Q8WYA6 563 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 GOLPH3Q9H4A6 298 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TDRD3Q9H7E2 651 aaKnown RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 GCOM1H8Y6P7 765 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 POLR2MP0CAP2 368 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ANXA13P27216 316 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CASP4P49662 377 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CYP2J2P51589 502 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CETN1Q12798 172 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CCDC26Q8TAB7 109 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 PCDHAC2Q9Y5I4 1007 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 IRF2BP2Q7Z5L9 587 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 AP1M1Q9BXS5 423 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 RAD51CO43502 376 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ECE2O60344 883 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ERLIN2O94905 339 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 HDLBPQ00341 1268 aaKnown RBP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 SPIRE1Q08AE8 756 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ODR4Q5SWX8 454 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 INPP4AQ96PE3 977 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 GDF3Q9NR23 364 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 AMFRQ9UKV5 643 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 EXOC3O60645 756 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 KRT13P13646 458 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 UBXN2AP68543 259 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CEP85LQ5SZL2 805 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CC2D2BQ6DHV5 1058 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 RINT1Q6NUQ1 792 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ARL8AQ96BM9 186 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TAF1DQ9H5J8 278 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ARHGEF35A5YM69 484 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 H0YIN7 160 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 KIAA0754O94854 1291 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TAL1P17542 331 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 LMNB1P20700 586 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ABCB4P21439 1286 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 NMT1P30419 496 aaKnown RBP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 PLS1Q14651 629 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 OLFML3Q9NRN5 406 aa12.75□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TNFAIP3P21580 790 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CIITAP33076 1130 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CUL1Q13616 776 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 EPHA7Q15375 998 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 RDH13Q8NBN7 331 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 GOLGA6L10A0A0M3HER8 536 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 BTNL10A8MVZ5 291 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 KCNA1Q09470 495 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TNIP1Q15025 636 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 DNAAF5Q86Y56 855 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CASKIN2Q8WXE0 1202 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 LENG9Q96B70 501 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 TCEAL9Q9UHQ7 104 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 ASTN1O14525 1302 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CCDC188H7C350 402 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 EML1O00423 815 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 CES2O00748 559 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 EIF3DO15371 548 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 FAM153BP0C7A2 387 aa12.74□□□□□ -0.37
CSPG4P4Y-201ENST00000333235 MYZAPP0CAP1 466 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms