RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SIX6OS1Q8N1H7 587 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 TTC16Q8NEE8 873 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 RIT2Q99578 217 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 DESI2Q9BSY9 194 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 GCOM2Q9BZD3 368 aaPredicted RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 TRIM31Q9BZY9 425 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 MYL3P08590 195 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 VIMP08670 466 aaKnown RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 ERCC3P19447 782 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 CASC4Q6P4E1 433 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 FRMD5Q7Z6J6 570 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 PSMD1Q99460 953 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 ANO9A1A5B4 782 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 SORBS3O60504 671 aa12.33□□□□□ -0.44
COL4A5-201ENST00000328300 RNASE9P60153 205 aaKnown RBP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 FTOQ9C0B1 505 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL4A5-201ENST00000328300 CCDC188H7C350 402 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 BUB1O43683 1085 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 RNF40O75150 1001 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 NDUFA10O95299 355 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 NMT2O60551 498 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 GYS1P13807 737 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 ASAP2O43150 1006 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 DGAT1O75907 488 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 RSRC1Q96IZ7 334 aaKnown RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 SAMSN1Q9NSI8 373 aaKnown RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 MCF2LO15068 1137 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 CETPP11597 493 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 FGFR2P21802 821 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 PCIF1Q9H4Z3 704 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 PPANQ9NQ55 473 aaKnown RBP12.32□□□□□ -0.44
COL4A5-201ENST00000328300 SYNPO2Q9UMS6 1093 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 ZNF148Q9UQR1 794 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 SNAP23O00161 211 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 EPHB4P54760 987 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 ASPHQ12797 758 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 TMEM35BQ8NCS4 154 aa12.32□□□□□ -0.44
COL4A5-201ENST00000328300 MAGEB2O15479 319 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 GFPT2O94808 682 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 NDUFB10O96000 172 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 TROVE2P10155 538 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 KRT39Q6A163 491 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 LXNQ9BS40 222 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 PCDHA13Q9Y5I0 950 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 POTEMA6NI47 508 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 EIF4A3P38919 411 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 GPC3P51654 580 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 DNAJC21Q5F1R6 531 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 ECEL1O95672 775 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 IL1R1P14778 569 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 C7orf25Q9BPX7 421 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 APOL6Q9BWW8 343 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 JPH1Q9HDC5 661 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 TAP1Q03518 808 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 RNF10Q8N5U6 811 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 PSMD14O00487 310 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 RASSF2P50749 326 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 MESDQ14696 234 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 SMYD4Q8IYR2 804 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 C7orf31Q8N865 590 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 PPFIBP2Q8ND30 876 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 RBM41Q96IZ5 413 aaKnown RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-201ENST00000328300 NDUFAB1O14561 156 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 EHHADHQ08426 723 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 MXD4Q14582 209 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms