RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NACC1Q96RE7 527 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 FANCLQ9NW38 375 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 MAFBQ9Y5Q3 323 aaPredicted RBP20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 TMEM150BA6NC51 233 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 LGR5O75473 907 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 EYA4O95677 639 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 INHAP05111 366 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 SSBP05455 408 aaKnown RBP eCLIP20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 GRK4P32298 578 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 IRX5P78411 483 aaPredicted RBP20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 FANCCQ00597 558 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 PRKCEQ02156 737 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 SV2BQ7L1I2 683 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 TRMT1LQ7Z2T5 733 aaKnown RBP20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 BHMT2Q9H2M3 363 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 NFE2L3Q9Y4A8 694 aa20.84■□□□□ 0.93
EXOSC3-201ENST00000327304 SEPT4O43236 478 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 KLRC4O43908 158 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 RHOBTB3O94955 611 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 STBD1O95210 358 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 CD44P16070 742 aaKnown RBP20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 ATP4AP20648 1035 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 CLCN1P35523 988 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 SLC12A3P55017 1021 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 FAM160B1Q5W0V3 765 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 KCTD17Q8N5Z5 321 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 TRIM9Q9C026 710 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 LRRC27Q9C0I9 530 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 IFNKQ9P0W0 207 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 PTPN22Q9Y2R2 807 aa20.83■□□□□ 0.93
EXOSC3-201ENST00000327304 CENPFP49454 3210 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 MYH9P35579 1960 aaKnown RBP20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 CBFA2T2O43439 604 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 MMP3P08254 477 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 HSPA1AP0DMV8 641 aaKnown RBP20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 HSPA1BP0DMV9 641 aaKnown RBP20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 ZNF18P17022 549 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 YWHABP31946 246 aaKnown RBP20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 SPATA1Q5VX52 437 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 AFAP1L1Q8TED9 768 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 MED15Q96RN5 788 aa20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 XPO4Q9C0E2 1151 aaKnown RBP20.83■□□□□ 0.92
EXOSC3-201ENST00000327304 EMSYQ7Z589 1322 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 MYMKA6NI61 221 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 DUSP11O75319 330 aaKnown RBP20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 HOXD8P13378 290 aaPredicted RBP20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 STAT5BP51692 787 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 PLA2G4FQ68DD2 849 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 GLG1Q92896 1179 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 AP5M1Q9H0R1 490 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 AZI2Q9H6S1 392 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 Q9Y3F1 56 aa20.82■□□□□ 0.92
EXOSC3-201ENST00000327304 SYNRGQ9UMZ2 1314 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 A6NJR5 290 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 ZNF500O60304 480 aaPredicted RBP20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 DKC1O60832 514 aaKnown RBP eCLIP20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 LGALS2P05162 132 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 ATP1A3P13637 1013 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 KMT5BQ4FZB7 885 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 CNNM4Q6P4Q7 775 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 ANO5Q75V66 913 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 CCDC186Q7Z3E2 898 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 GPBP1Q86WP2 473 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 SYT2Q8N9I0 419 aaPredicted RBP20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 SH3TC2Q8TF17 1288 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 SH2D3AQ9BRG2 576 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 IMPACTQ9P2X3 320 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 SERPINC1P01008 464 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 ZNF286BP0CG31 522 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 LBX1P52954 281 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 RUSC1Q9BVN2 902 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 RWDD2AQ9UIY3 292 aa20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 DBR1Q9UK59 544 aaKnown RBP20.81■□□□□ 0.92
EXOSC3-201ENST00000327304 PPFIA4O75335 1185 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 OATP04181 439 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 CYP11B2P19099 503 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 MARK3P27448 753 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 PPP1R2P41236 205 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 RARRES1P49788 294 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 UBASH3AP57075 661 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 BEX3Q00994 111 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 ARSHQ5FYA8 562 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 XKR3Q5GH77 459 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 PLPPR4Q7Z2D5 763 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 SMYD4Q8IYR2 804 aaPredicted RBP20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 SMARCAD1Q9H4L7 1026 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 ANKEF1Q9NU02 776 aa20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 SEPT9Q9UHD8 586 aaPredicted RBP20.8■□□□□ 0.92
EXOSC3-201ENST00000327304 NPHP3-ACAD11A0A0J9YXS1 232 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 ARHGEF35A5YM69 484 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 MYADML2A6NDP7 307 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 RARBP10826 455 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 CTCFP49711 727 aaPredicted RBP20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 NPEPPSP55786 919 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 DGKDQ16760 1214 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 DYMQ7RTS9 669 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 LOXHD1Q8IVV2 1947 aa20.79■□□□□ 0.92
EXOSC3-201ENST00000327304 PVALEFA0A1B0GWK0 134 aa20.78■□□□□ 0.92
EXOSC3-201ENST00000327304 GJA9P57773 515 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms