RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GGA2Q9UJY4 613 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 H3BQF6 201 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 GARSP41250 739 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CTDSPL2Q05D32 466 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 MED21Q13503 144 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 RINT1Q6NUQ1 792 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 PCGF5Q86SE9 256 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 NEK8Q86SG6 692 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 MYCT1Q8N699 235 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 NDST4Q9H3R1 872 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
SMC1A-201ENST00000322213 DDX20Q9UHI6 824 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 DBNLQ9UJU6 430 aaKnown RBP7.57□□□□□ -1.2
SMC1A-201ENST00000322213 ZRANB2O95218 330 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 GCKRQ14397 625 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RHOT2Q8IXI1 618 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 FANCBQ8NB91 859 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 FNBP1Q96RU3 617 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 LRRC1Q9BTT6 524 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 LRCH1Q9Y2L9 728 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 NDUFB9Q9Y6M9 179 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RSPH10B2B2RC85 870 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ADCY3O60266 1144 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 AFPP02771 609 aaKnown RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RSPH10BP0C881 870 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 YY1P25490 414 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 TXKP42681 527 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 NUDCD3Q8IVD9 361 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 VTI1AQ96AJ9 217 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 GORASP1Q9BQQ3 440 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 UBAP1Q9NZ09 502 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RGPD1P0DJD0 1748 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 O00370 1275 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 CCDC22O60826 627 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 HSPA13P48723 471 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 GFPT1Q06210 699 aaPredicted RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ADAM9Q13443 819 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 KBTBD12Q3ZCT8 623 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 LONP2Q86WA8 852 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 PLBD2Q8NHP8 589 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF148Q9UQR1 794 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 MROH7-TTC4A0A0A0MT08 1334 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ESYT3A0FGR9 886 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RTN3O95197 1032 aaPredicted RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 IMPDH2P12268 514 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 GFAPP14136 432 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 NR2F2P24468 414 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ASPHQ12797 758 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 CADPS2Q86UW7 1296 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 SUCLG2Q96I99 432 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 PPCSQ9HAB8 311 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 C4AP0C0L4 1744 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 C4BP0C0L5 1744 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 SERPINI2O75830 405 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 MYL7Q01449 175 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RCN1Q15293 331 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 CRELD2Q6UXH1 353 aaPredicted RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 DYMQ7RTS9 669 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF804AQ7Z570 1209 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ELOA2Q8IYF1 753 aaPredicted RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 SLC17A8Q8NDX2 589 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ATP6V0A1Q93050 837 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 DCLRE1BQ9H816 532 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 MIF4GDA9UHW6 222 aaKnown RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ZNF185O15231 689 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 MAP3K7CLP57077 242 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 POLA2Q14181 598 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 FAM81BQ96LP2 452 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 CCDC138Q96M89 665 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 DDX25Q9UHL0 483 aaKnown RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 UBE4BO95155 1302 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 EIF4E1BA6NMX2 242 aaKnown RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 EXOC3O60645 756 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 CYP21A2P08686 494 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 TMOD1P28289 359 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 PGM1P36871 562 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 MTA1Q13330 715 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RASA3Q14644 834 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 MTF1Q14872 753 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 TBCCQ15814 346 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 KSR1Q8IVT5 923 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 ANKRD13CQ8N6S4 541 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 NOA1Q8NC60 698 aaKnown RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 SUGCTQ9HAC7 445 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 RXFP1Q9HBX9 757 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 STK17AQ9UEE5 414 aa7.56□□□□□ -1.2
SMC1A-201ENST00000322213 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
SMC1A-201ENST00000322213 FOXO3O43524 673 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SASH3O75995 380 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ADD1P35611 737 aaKnown RBP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 RAP1GDS1P52306 607 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMC1A-201ENST00000322213 CAVIN3Q969G5 261 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 SIKE1Q9BRV8 207 aa7.55□□□□□ -1.2
SMC1A-201ENST00000322213 ANKZF1Q9H8Y5 726 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms