RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 MCM7P33993 719 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 XKR3Q5GH77 459 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 BANK1Q8NDB2 785 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 APBB2Q92870 758 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 PCDHA12Q9UN75 941 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 PCDHA11Q9Y5I1 949 aa16.47■□□□□ 0.23
TUBA3D-201ENST00000321253 WNT7AO00755 349 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 AMHP03971 560 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 TMOD1P28289 359 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 QARSP47897 775 aaKnown RBP16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 NKX2-4Q9H2Z4 354 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 TTC12Q9H892 705 aaPredicted RBP16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 SLC28A3Q9HAS3 691 aa16.46■□□□□ 0.23
TUBA3D-201ENST00000321253 DDX11L8A8MPP1 907 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 H3BQV1 296 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 P4HBP07237 508 aaKnown RBP16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 TXKP42681 527 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 TRAPPC10P48553 1259 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 DEFB103AP81534 67 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 TBC1D8BQ0IIM8 1120 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 ORC2Q13416 577 aaPredicted RBP16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 LPIN1Q14693 890 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 EPHA7Q15375 998 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 FBXO47Q5MNV8 452 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 KIAA0319LQ8IZA0 1049 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 USP38Q8NB14 1042 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 MAP7D2Q96T17 732 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 OSBPL7Q9BZF2 842 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 ZNF576Q9H609 170 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 YBX2Q9Y2T7 364 aaKnown RBP16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 GBF1Q92538 1859 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 TLL1O43897 1013 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 ZNF174Q15697 407 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 MTERF2Q49AM1 385 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 EFCAB12Q6NXP0 572 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 MTMR9Q96QG7 549 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 NIFKQ9BYG3 293 aaKnown RBP16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 AKT3Q9Y243 479 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
TUBA3D-201ENST00000321253 KDM3AQ9Y4C1 1321 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 SIP14410 1827 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 EVPLQ92817 2033 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 MYOGP15173 224 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 CLCN3P51790 818 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 PPP2R2DQ66LE6 453 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 MYOCDQ8IZQ8 938 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 GUCD1Q96NT3 240 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 LXNQ9BS40 222 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
TUBA3D-201ENST00000321253 MICAL3Q7RTP6 2002 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 CA3P07451 260 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 CD52P31358 61 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 CYP4A11Q02928 519 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 PAK2Q13177 524 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 TARBP2Q15633 366 aaKnown RBP16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 TMCO2Q7Z6W1 182 aaPredicted RBP16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 NEK9Q8TD19 979 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 DYDC2Q96IM9 177 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 ZSWIM4Q9H7M6 989 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 AGO3Q9H9G7 860 aaKnown RBP16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 RGL1Q9NZL6 768 aa16.43■□□□□ 0.22
TUBA3D-201ENST00000321253 STBD1O95210 358 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 GJB5O95377 273 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 VTNP04004 478 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 OR52Z1P0C646 297 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 CUL4AQ13619 759 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 KIZQ2M2Z5 673 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 ODR4Q5SWX8 454 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 LARP1BQ659C4 914 aaKnown RBP16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 ANO5Q75V66 913 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 TPH2Q8IWU9 490 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 CDX2Q99626 313 aaPredicted RBP16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 EIF2AK1Q9BQI3 630 aaKnown RBP16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 JPH2Q9BR39 696 aaPredicted RBP16.42■□□□□ 0.22
TUBA3D-201ENST00000321253 SH2D3AQ9BRG2 576 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms