RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ARID5AQ03989 594 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 PGM5Q15124 567 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 BMT2Q1RMZ1 405 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 PDXDC1Q6P996 788 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 FRMD5Q7Z6J6 570 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 AGO4Q9HCK5 861 aaKnown RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 JADE2Q9NQC1 790 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 GGA3Q9NZ52 723 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 CEP72Q9P209 647 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 UBIAD1Q9Y5Z9 338 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 FRMPD4Q14CM0 1322 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 P4HBP07237 508 aaKnown RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 H2AFXP16104 143 aaPredicted RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 VAV2P52735 878 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 BAATQ14032 418 aaPredicted RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 PLS1Q14651 629 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 ENOX2Q16206 610 aaKnown RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 ARHGEF16Q5VV41 709 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 ZNF720Q7Z2F6 126 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 SRGAP1Q7Z6B7 1085 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 APOBEC3FQ8IUX4 373 aaKnown RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 PDCD2LQ9BRP1 358 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 EDEM3Q9BZQ6 932 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
IFT88-201ENST00000319980 HDAC6Q9UBN7 1215 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 MYO6Q9UM54 1294 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 PCDHA13Q9Y5I0 950 aa8.32□□□□□ -1.08
IFT88-201ENST00000319980 EIF3DO15371 548 aaKnown RBP eCLIP8.31□□□□□ -1.08
IFT88-201ENST00000319980 ATP9AO75110 1047 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 HIP1RO75146 1068 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 EPB41P11171 864 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 ACTN1P12814 892 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SLC9A1P19634 815 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 CLCN6P51797 869 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 GHRHRQ02643 423 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 GFPT1Q06210 699 aaPredicted RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 COG2Q14746 738 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SLC9C1Q4G0N8 1177 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SFMBT2Q5VUG0 894 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ZNF662Q6ZS27 426 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 RSRC2Q7L4I2 434 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 NIPA1Q7RTP0 329 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 CEP112Q8N8E3 955 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 EHBP1Q8NDI1 1231 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 GOLGA1Q92805 767 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 FIZ1Q96SL8 496 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 RNF146Q9NTX7 359 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 GPRC5DQ9NZD1 345 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 KCND2Q9NZV8 630 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ZNF112Q9UJU3 913 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ODF2LQ9ULJ1 636 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 TLR2O60603 784 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 USO1O60763 962 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 AFPP02771 609 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 ATP1A1P05023 1023 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 ZNF131P52739 623 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 HIRAP54198 1017 aaPredicted RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 TUBB2AQ13885 445 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 RAPGEF1Q13905 1077 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 GPR162Q16538 588 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 HGSNATQ68CP4 663 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SNRNP48Q6IEG0 339 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 NEK9Q8TD19 979 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 KLRG1Q96E93 195 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 TUBB2BQ9BVA1 445 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 METTL14Q9HCE5 456 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 PXMP2Q9NR77 195 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 TBC1D22BQ9NU19 505 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SEL1LQ9UBV2 794 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 TCEAL9Q9UHQ7 104 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 TMEM150BA6NC51 233 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SRGAP2O75044 1071 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 FDX1P10109 184 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 GUCY2CP25092 1073 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 QARSP47897 775 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 AMPD2Q01433 879 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 EXOC3L4Q17RC7 722 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 UTP14CQ5TAP6 766 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 HS2ST1Q7LGA3 356 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 DAW1Q8N136 415 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ANKRD13CQ8N6S4 541 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 FAM133AQ8N9E0 248 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 RABGGTAQ92696 567 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 SECISBP2LQ93073 1101 aaKnown RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 SLC35C1Q96A29 364 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ARGLU1Q9NWB6 273 aaPredicted RBP8.31□□□□□ -1.08
IFT88-201ENST00000319980 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
IFT88-201ENST00000319980 ZSCAN20P17040 1043 aaPredicted RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 YWHABP31946 246 aaKnown RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 MAGEA1P43355 309 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 RARRES1P49788 294 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 ASTE1Q2TB18 679 aaPredicted RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 DLK2Q6UY11 383 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 STXBP4Q6ZWJ1 553 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms