RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 PABPC4Q13310 644 aaKnown RBP eCLIP9.34□□□□□ -0.91
USF3-201ENST00000316407 CDR2LQ86X02 465 aaPredicted RBP9.34□□□□□ -0.91
USF3-201ENST00000316407 LARP4BQ92615 738 aaKnown RBP9.34□□□□□ -0.91
USF3-201ENST00000316407 STAMBPL1Q96FJ0 436 aa9.34□□□□□ -0.91
USF3-201ENST00000316407 EYA3Q99504 573 aa9.34□□□□□ -0.91
USF3-201ENST00000316407 DDX47Q9H0S4 455 aaKnown RBP9.34□□□□□ -0.91
USF3-201ENST00000316407 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
USF3-201ENST00000316407 TRIM37O94972 964 aa9.34□□□□□ -0.92
USF3-201ENST00000316407 HIC1Q14526 733 aa9.34□□□□□ -0.92
USF3-201ENST00000316407 APOA5Q6Q788 366 aa9.34□□□□□ -0.92
USF3-201ENST00000316407 PDZD4Q76G19 769 aaPredicted RBP9.34□□□□□ -0.92
USF3-201ENST00000316407 FAM81BQ96LP2 452 aa9.34□□□□□ -0.92
USF3-201ENST00000316407 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.92
USF3-201ENST00000316407 RMI1Q9H9A7 625 aa9.34□□□□□ -0.92
USF3-201ENST00000316407 EIF3HO15372 352 aaKnown RBP eCLIP9.33□□□□□ -0.92
USF3-201ENST00000316407 DNAJC24Q6P3W2 148 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 USE1Q9NZ43 259 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 RSPH10B2B2RC85 870 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 RSPH10BP0C881 870 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 CD58P19256 250 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 POLGP54098 1239 aaPredicted RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 SFR1Q86XK3 245 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 RNF135Q8IUD6 432 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 SLC40A1Q9NP59 571 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 ABCC12Q96J65 1359 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 IKBKBO14920 756 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 EME1Q96AY2 570 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 PHF8Q9UPP1 1060 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 CAND2O75155 1236 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 ARMCX5Q6P1M9 558 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 GLG1Q92896 1179 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 TFCP2L1Q9NZI6 479 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 M0R2C6 588 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 SERPING1P05155 500 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 LMBRD2Q68DH5 695 aaPredicted RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 ZBED8Q8IZ13 594 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 P2RX5Q93086 422 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 SUCLG2Q96I99 432 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 MS4A14Q96JA4 679 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 V9GYQ6 96 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 NR5A1Q13285 461 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 RCN1Q15293 331 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 UTP6Q9NYH9 597 aaKnown RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 NOD1Q9Y239 953 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 PIK3C2GO75747 1445 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 CSPG5O95196 566 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 EIF2B2P49770 351 aaKnown RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 KCNF1Q9H3M0 494 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 ZCCHC18P0CG32 403 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 APOL6Q9BWW8 343 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 PARVGQ9HBI0 331 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 NEMP1O14524 444 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 UFL1O94874 794 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 ZNF18P17022 549 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 HNRNPH1P31943 449 aaKnown RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 POLA2Q14181 598 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 FAM26FQ5R3K3 315 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 C11orf74Q86VG3 221 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 RIN2Q8WYP3 895 aaPredicted RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 GFM2Q969S9 779 aaKnown RBP9.33□□□□□ -0.92
USF3-201ENST00000316407 CSRNP1Q96S65 589 aa9.33□□□□□ -0.92
USF3-201ENST00000316407 MEIS1O00470 390 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 HSPA6P17066 643 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 CASP1P29466 404 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 PDIA3P30101 505 aaKnown RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 SIX5Q8N196 739 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TEX9Q8N6V9 391 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 FAF2Q96CS3 445 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 ADAMTS1Q9UHI8 967 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 KRT37O76014 449 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 CHEK2O96017 543 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TFAMQ00059 246 aaKnown RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 TBCCQ15814 346 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 SPATA21Q7Z572 469 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 CDH24Q86UP0 819 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 ZNF473Q8WTR7 871 aaKnown RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 CCT7Q99832 543 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
USF3-201ENST00000316407 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 HSPBP1Q9NZL4 362 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.32□□□□□ -0.92
USF3-201ENST00000316407 ZBED1O96006 694 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 TMEM191BP0C7N4 346 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 POU5F1BQ06416 359 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 SLC39A14Q15043 492 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 UTS2BQ765I0 119 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 DDIASQ8IXT1 998 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 DEPTORQ8TB45 409 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 PI4K2BQ8TCG2 481 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 NEUROG2Q9H2A3 272 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 UBN2Q6ZU65 1347 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 EYA2O00167 538 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 FRA10AC1Q70Z53 315 aa9.32□□□□□ -0.92
USF3-201ENST00000316407 THTPAQ9BU02 230 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms