RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ENOX1Q8TC92 643 aaKnown RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 RNF41Q9H4P4 317 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZNF70Q9UC06 446 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 SERTAD1Q9UHV2 236 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 MAN1B1Q9UKM7 699 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 TCP10L2B9ZVM9 353 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 WNT10BO00744 389 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 CYP2D6P10635 497 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 SKIP12755 728 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZFXP17010 805 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 NFIAQ12857 509 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 TBX2Q13207 712 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 TSHZ1Q6ZSZ6 1077 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 KSR1Q8IVT5 923 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 TRIML1Q8N9V2 468 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 MORC4Q8TE76 937 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 DNAJC9Q8WXX5 260 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 STAMQ92783 540 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 NUDCD1Q96RS6 583 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 INTS9Q9NV88 658 aaKnown RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 SPATA7Q9P0W8 599 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 PSME4Q14997 1843 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 E7EWF7 191 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 MMEP08473 750 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 ADD1P35611 737 aaKnown RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 CBX3Q13185 183 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 PDIA5Q14554 519 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 SMCR8Q8TEV9 937 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 TRIM11Q96F44 468 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 WDR35Q9P2L0 1181 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 CTNND2Q9UQB3 1225 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 PDE2AO00408 941 aaPredicted RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 HLA-DOAP06340 250 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 EPS15P42566 896 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 MYBPC3Q14896 1274 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 DDX4Q9NQI0 724 aaKnown RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 ATXN10Q9UBB4 475 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 CDC27P30260 824 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 MSH2P43246 934 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 SETDB1Q15047 1291 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 NFRKBQ6P4R8 1299 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 RAB3IPQ96QF0 476 aaPredicted RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 IDI2Q9BXS1 227 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 USP46P62068 366 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 ERVK-24P63145 666 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 SEPT7Q16181 437 aaKnown RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 C16orf87Q6PH81 154 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 NCOA7Q8NI08 942 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 PCMTD2Q9NV79 361 aa12.66□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 GLTPD2A6NH11 291 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 UBOX5O94941 541 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 EGFRP00533 1210 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 FAM153BP0C7A2 387 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 TNNI2P48788 182 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 NR1I3Q14994 352 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 FAM153AQ9UHL3 310 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 GGA2Q9UJY4 613 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 UBTFL6P0CB48 400 aaPredicted RBP12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 ETS2P15036 469 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 EEF2KMTQ96G04 330 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 CNNM2Q9H8M5 875 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
LDLRAD3-201ENST00000315571 SBF1O95248 1867 aa12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 TRAPPC3O43617 180 aa12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 CYP11B2P19099 503 aa12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 ALG1Q9BT22 464 aa12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 ADARB2Q9NS39 739 aaKnown RBP12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.39
LDLRAD3-201ENST00000315571 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 BUB1O43683 1085 aa12.64□□□□□ -0.39
LDLRAD3-201ENST00000315571 ENTPD3O75355 529 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms