RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PRKCEQ02156 737 aa8.83□□□□□ -1
CDC42-201ENST00000315554 PPFIA1Q13136 1202 aa8.83□□□□□ -1
CDC42-201ENST00000315554 SF3A1Q15459 793 aaKnown RBP8.83□□□□□ -1
CDC42-201ENST00000315554 GRIK4Q16099 956 aa8.83□□□□□ -1
CDC42-201ENST00000315554 IL17AQ16552 155 aa8.83□□□□□ -1
CDC42-201ENST00000315554 C1orf53Q5VUE5 145 aa8.83□□□□□ -1
CDC42-201ENST00000315554 AFAP1L1Q8TED9 768 aa8.83□□□□□ -1
CDC42-201ENST00000315554 LMBR1Q8WVP7 490 aa8.83□□□□□ -1
CDC42-201ENST00000315554 DHX38Q92620 1227 aaKnown RBP8.83□□□□□ -1
CDC42-201ENST00000315554 WNT8BQ93098 351 aa8.83□□□□□ -1
CDC42-201ENST00000315554 CTAGE1Q96RT6 745 aa8.83□□□□□ -1
CDC42-201ENST00000315554 WRAP73Q9P2S5 460 aaPredicted RBP8.83□□□□□ -1
CDC42-201ENST00000315554 GTF2IRD1Q9UHL9 959 aa8.83□□□□□ -1
CDC42-201ENST00000315554 PCDHA12Q9UN75 941 aa8.83□□□□□ -1
CDC42-201ENST00000315554 IGSF9BQ9UPX0 1349 aa8.83□□□□□ -1
CDC42-201ENST00000315554 MKI67P46013 3256 aaKnown RBP8.83□□□□□ -1
CDC42-201ENST00000315554 ZBTB39O15060 712 aa8.83□□□□□ -1
CDC42-201ENST00000315554 OATP04181 439 aa8.83□□□□□ -1
CDC42-201ENST00000315554 CDC25AP30304 524 aa8.83□□□□□ -1
CDC42-201ENST00000315554 CYP2C18P33260 490 aa8.83□□□□□ -1
CDC42-201ENST00000315554 CCL23P55773 120 aa8.83□□□□□ -1
CDC42-201ENST00000315554 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
CDC42-201ENST00000315554 ORC2Q13416 577 aaPredicted RBP8.83□□□□□ -1
CDC42-201ENST00000315554 EPHA7Q15375 998 aa8.83□□□□□ -1
CDC42-201ENST00000315554 PLA2G4FQ68DD2 849 aa8.83□□□□□ -1
CDC42-201ENST00000315554 RUFY4Q6ZNE9 571 aa8.83□□□□□ -1
CDC42-201ENST00000315554 PLPPR4Q7Z2D5 763 aa8.83□□□□□ -1
CDC42-201ENST00000315554 TPH2Q8IWU9 490 aa8.83□□□□□ -1
CDC42-201ENST00000315554 ATP8B4Q8TF62 1192 aa8.83□□□□□ -1
CDC42-201ENST00000315554 ATP6V0A1Q93050 837 aa8.83□□□□□ -1
CDC42-201ENST00000315554 TOX2Q96NM4 488 aa8.83□□□□□ -1
CDC42-201ENST00000315554 USP28Q96RU2 1077 aa8.83□□□□□ -1
CDC42-201ENST00000315554 EIF2AK1Q9BQI3 630 aaKnown RBP8.83□□□□□ -1
CDC42-201ENST00000315554 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
CDC42-201ENST00000315554 PRKAG2Q9UGJ0 569 aa8.83□□□□□ -1
CDC42-201ENST00000315554 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
CDC42-201ENST00000315554 TBX21Q9UL17 535 aa8.83□□□□□ -1
CDC42-201ENST00000315554 ZDHHC9Q9Y397 364 aa8.83□□□□□ -1
CDC42-201ENST00000315554 MAFBQ9Y5Q3 323 aaPredicted RBP8.83□□□□□ -1
CDC42-201ENST00000315554 NR2E3Q9Y5X4 410 aa8.83□□□□□ -1
CDC42-201ENST00000315554 MROH7Q68CQ1 1323 aa8.83□□□□□ -1
CDC42-201ENST00000315554 VWA3AA6NCI4 1184 aa8.82□□□□□ -1
CDC42-201ENST00000315554 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
CDC42-201ENST00000315554 MED24O75448 989 aa8.82□□□□□ -1
CDC42-201ENST00000315554 RAG1P15918 1043 aa8.82□□□□□ -1
CDC42-201ENST00000315554 MARCKSP29966 332 aaPredicted RBP8.82□□□□□ -1
CDC42-201ENST00000315554 PSMC5P62195 406 aa8.82□□□□□ -1
CDC42-201ENST00000315554 ATP2C1P98194 919 aaPredicted RBP8.82□□□□□ -1
CDC42-201ENST00000315554 GRIN1Q05586 938 aa8.82□□□□□ -1
CDC42-201ENST00000315554 PTPN11Q06124 597 aaPredicted RBP8.82□□□□□ -1
CDC42-201ENST00000315554 ZRSR1Q15695 479 aaKnown RBP8.82□□□□□ -1
CDC42-201ENST00000315554 TMEM266Q2M3C6 531 aa8.82□□□□□ -1
CDC42-201ENST00000315554 MTERF2Q49AM1 385 aa8.82□□□□□ -1
CDC42-201ENST00000315554 MARCH8Q5T0T0 291 aa8.82□□□□□ -1
CDC42-201ENST00000315554 SESTD1Q86VW0 696 aa8.82□□□□□ -1
CDC42-201ENST00000315554 RDM1Q8NG50 284 aa8.82□□□□□ -1
CDC42-201ENST00000315554 BADQ92934 168 aa8.82□□□□□ -1
CDC42-201ENST00000315554 SCLYQ96I15 445 aa8.82□□□□□ -1
CDC42-201ENST00000315554 PPP1R16BQ96T49 567 aa8.82□□□□□ -1
CDC42-201ENST00000315554 LXNQ9BS40 222 aa8.82□□□□□ -1
CDC42-201ENST00000315554 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
CDC42-201ENST00000315554 FAM49AQ9H0Q0 323 aaPredicted RBP8.82□□□□□ -1
CDC42-201ENST00000315554 HIPK3Q9H422 1215 aa8.82□□□□□ -1
CDC42-201ENST00000315554 ZSCAN16Q9H4T2 348 aaPredicted RBP8.82□□□□□ -1
CDC42-201ENST00000315554 LRWD1Q9UFC0 647 aa8.82□□□□□ -1
CDC42-201ENST00000315554 TNRC18O15417 2968 aaPredicted RBP8.81□□□□□ -1
CDC42-201ENST00000315554 NRCAMQ92823 1304 aa8.81□□□□□ -1
CDC42-201ENST00000315554 ZBTB42B2RXF5 422 aa8.81□□□□□ -1
CDC42-201ENST00000315554 KIAA0355O15063 1070 aa8.81□□□□□ -1
CDC42-201ENST00000315554 HBP1O60381 514 aa8.81□□□□□ -1
CDC42-201ENST00000315554 SLITRK3O94933 977 aa8.81□□□□□ -1
CDC42-201ENST00000315554 STBD1O95210 358 aa8.81□□□□□ -1
CDC42-201ENST00000315554 BRD1O95696 1058 aa8.81□□□□□ -1
CDC42-201ENST00000315554 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
CDC42-201ENST00000315554 CTSHP09668 335 aa8.81□□□□□ -1
CDC42-201ENST00000315554 QARSP47897 775 aaKnown RBP8.81□□□□□ -1
CDC42-201ENST00000315554 NPEPPSP55786 919 aa8.81□□□□□ -1
CDC42-201ENST00000315554 PTPAQ15257 358 aa8.81□□□□□ -1
CDC42-201ENST00000315554 DTHD1Q6ZMT9 781 aa8.81□□□□□ -1
CDC42-201ENST00000315554 WNT2BQ93097 391 aa8.81□□□□□ -1
CDC42-201ENST00000315554 PLIN2Q99541 437 aa8.81□□□□□ -1
CDC42-201ENST00000315554 SEZ6LQ9BYH1 1024 aa8.81□□□□□ -1
CDC42-201ENST00000315554 TUBE1Q9UJT0 475 aa8.81□□□□□ -1
CDC42-201ENST00000315554 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
CDC42-201ENST00000315554 PDE4DIPQ5VU43 2346 aa8.8□□□□□ -1
CDC42-201ENST00000315554 TIMP1P01033 207 aa8.8□□□□□ -1
CDC42-201ENST00000315554 SPATA31C1P0DKV0 1188 aa8.8□□□□□ -1
CDC42-201ENST00000315554 KLRC1P26715 233 aa8.8□□□□□ -1
CDC42-201ENST00000315554 HOXC8P31273 242 aa8.8□□□□□ -1
CDC42-201ENST00000315554 THPOP40225 353 aa8.8□□□□□ -1
CDC42-201ENST00000315554 CCT6AP40227 531 aaKnown RBP8.8□□□□□ -1
CDC42-201ENST00000315554 PRPHP41219 470 aa8.8□□□□□ -1
CDC42-201ENST00000315554 MAGEA10P43363 369 aaPredicted RBP8.8□□□□□ -1
CDC42-201ENST00000315554 SLC26A2P50443 739 aa8.8□□□□□ -1
CDC42-201ENST00000315554 ADAM17P78536 824 aa8.8□□□□□ -1
CDC42-201ENST00000315554 DNM1Q05193 864 aaKnown RBP8.8□□□□□ -1
CDC42-201ENST00000315554 TMEM62Q0P6H9 643 aa8.8□□□□□ -1
CDC42-201ENST00000315554 PTK7Q13308 1070 aa8.8□□□□□ -1
CDC42-201ENST00000315554 STK38Q15208 465 aa8.8□□□□□ -1
CDC42-201ENST00000315554 ECM1Q16610 540 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms