RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 STAT5BP51692 787 aa14.58□□□□□ -0.07
RFFL-201ENST00000315249 PSMD6Q15008 389 aa14.58□□□□□ -0.07
RFFL-201ENST00000315249 GOLGA8CPA6NN73 597 aa14.58□□□□□ -0.07
RFFL-201ENST00000315249 NEDD1Q8NHV4 660 aa14.58□□□□□ -0.07
RFFL-201ENST00000315249 PAGE5Q96GU1 130 aa14.58□□□□□ -0.07
RFFL-201ENST00000315249 RILPQ96NA2 401 aa14.58□□□□□ -0.07
RFFL-201ENST00000315249 NGRNQ9NPE2 291 aaKnown RBP14.58□□□□□ -0.07
RFFL-201ENST00000315249 GGPS1O95749 300 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 RECQLP46063 649 aaPredicted RBP14.58□□□□□ -0.08
RFFL-201ENST00000315249 PAK2Q13177 524 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 PASD1Q8IV76 773 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 YAF2Q8IY57 180 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 DPF3Q92784 378 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 GDAP1L1Q96MZ0 367 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 SH2D3AQ9BRG2 576 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 KATNAL1Q9BW62 490 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 PLA2G12BQ9BX93 195 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 DDNO94850 711 aaPredicted RBP14.58□□□□□ -0.08
RFFL-201ENST00000315249 TUBB2AQ13885 445 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 SEPT6Q14141 434 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 NXNQ6DKJ4 435 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 HHIPL2Q6UWX4 724 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 TRIM11Q96F44 468 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 CHMP6Q96FZ7 201 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 TRIM56Q9BRZ2 755 aaKnown RBP14.58□□□□□ -0.08
RFFL-201ENST00000315249 TUBB2BQ9BVA1 445 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 E9PMD0 336 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 NEMP1O14524 444 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 ZWINTO95229 277 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 ATF2P15336 505 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 VEGFAP15692 232 aaPredicted RBP14.58□□□□□ -0.08
RFFL-201ENST00000315249 MYLK4Q86YV6 388 aaPredicted RBP14.58□□□□□ -0.08
RFFL-201ENST00000315249 RNF149Q8NC42 400 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 PPP2R3CQ969Q6 453 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 EPN1Q9Y6I3 576 aaPredicted RBP14.58□□□□□ -0.08
RFFL-201ENST00000315249 A0A1W2PQ27 194 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 A0A1W2PQ64 194 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 A0A1W2PQD8 194 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 CLGNO14967 610 aa14.58□□□□□ -0.08
RFFL-201ENST00000315249 GTF2A2P52657 109 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 PSMC5P62195 406 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 ARL6IP4Q66PJ3 421 aaKnown RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 PDCD6IPQ8WUM4 868 aaKnown RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 HINFPQ9BQA5 517 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 EIF2AK1Q9BQI3 630 aaKnown RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 MRPL47Q9HD33 250 aaKnown RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 ZNF521Q96K83 1311 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 ENTPD3O75355 529 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 ERICH1Q86X53 443 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 OXER1Q8TDS5 423 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 MCF2LO15068 1137 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 CASP14P31944 242 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 SFR1Q86XK3 245 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 TTC1Q99614 292 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 PCDHA10Q9Y5I2 948 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 KDM6AO15550 1401 aaPredicted RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 TADA2AO75478 443 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 KRT1P04264 644 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 DPCR1Q3MIW9 517 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
RFFL-201ENST00000315249 AGBL3Q8NEM8 1001 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 CFAP57Q96MR6 1250 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 ZWILCHQ9H900 591 aa14.57□□□□□ -0.08
RFFL-201ENST00000315249 AGLP35573 1532 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 TDP2O95551 362 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 ACCSLQ4AC99 568 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 PPP1R18Q6NYC8 613 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 MAP3K20Q9NYL2 800 aaKnown RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 SUCLA2Q9P2R7 463 aaPredicted RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 MYL1P05976 194 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 DARS2Q6PI48 645 aaKnown RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 P3H4Q92791 437 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 GH1P01241 217 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 EEF1GP26641 437 aaKnown RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 S100BP04271 92 aaPredicted RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 RNF180Q86T96 592 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 ANKRD42Q8N9B4 389 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 GBA2Q9HCG7 927 aaPredicted RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 ANGPTL3Q9Y5C1 460 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 CDC27P30260 824 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 ZNF131P52739 623 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 FAM217BQ9NTX9 383 aaPredicted RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 HYOU1Q9Y4L1 999 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 GBP1P32455 592 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 GCLMP48507 274 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 YWHAGP61981 247 aaKnown RBP eCLIP14.56□□□□□ -0.08
RFFL-201ENST00000315249 VEPH1Q14D04 833 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 GLYCTKQ8IVS8 523 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 SAAL1Q96ER3 474 aa14.56□□□□□ -0.08
RFFL-201ENST00000315249 INO80Q9ULG1 1556 aaPredicted RBP14.56□□□□□ -0.08
RFFL-201ENST00000315249 CACNB2Q08289 660 aaPredicted RBP14.55□□□□□ -0.08
RFFL-201ENST00000315249 ADAMTS13Q76LX8 1427 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 YWHABP31946 246 aaKnown RBP14.55□□□□□ -0.08
RFFL-201ENST00000315249 ZNF445P59923 1031 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 KRT71Q3SY84 523 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 GKAP1Q5VSY0 366 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms