RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TSHZ1Q6ZSZ6 1077 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 RTN4RL1Q86UN2 441 aaPredicted RBP16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 RDM1Q8NG50 284 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 WASF1Q92558 559 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 TMX1Q9H3N1 280 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 TRPV2Q9Y5S1 764 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 SQORQ9Y6N5 450 aa16.49■□□□□ 0.23
PPP1CA-201ENST00000312989 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 BTBD18B2RXH4 712 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 CD2BP2O95400 341 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 OATP04181 439 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 RPLP2P05387 115 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 XBP1P17861 261 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 POU3F3P20264 500 aaPredicted RBP16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 CD52P31358 61 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 SFNP31947 248 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 KRT2P35908 639 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 JAK3P52333 1124 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 PPP2R5CQ13362 524 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 RSPH3Q86UC2 560 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 POTEDQ86YR6 584 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 MYOCDQ8IZQ8 938 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 CERS4Q9HA82 394 aa16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
PPP1CA-201ENST00000312989 TMEM150BA6NC51 233 aa16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 ENPP3O14638 875 aa16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 GPR32O75388 356 aa16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 AMHP03971 560 aa16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 GCFC2P16383 781 aaKnown RBP16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 FAM117BQ6P1L5 589 aa16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 DIS3L2Q8IYB7 885 aaKnown RBP16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 NME8Q8N427 588 aa16.47■□□□□ 0.23
PPP1CA-201ENST00000312989 KIF28PB7ZC32 967 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 TBX3O15119 743 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 IER5Q5VY09 327 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 MIER3Q7Z3K6 550 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 SLC17A8Q8NDX2 589 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 LLPHQ9BRT6 129 aaKnown RBP16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 ERVK-5Q9HDB9 667 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 SAMM50Q9Y512 469 aa16.46■□□□□ 0.23
PPP1CA-201ENST00000312989 IGKV6-21A0A0C4DH24 114 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 MGEA5O60502 916 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 CCNT1O60563 726 aaKnown RBP16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 CLCN3P51790 818 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 FOSBP53539 338 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 ERVK-21P61565 698 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 DRP2Q13474 957 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 ANO5Q75V66 913 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 TRMT1LQ7Z2T5 733 aaKnown RBP16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 ARNTL2Q8WYA1 636 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 FAM20AQ96MK3 541 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 GAS2L1Q99501 681 aaPredicted RBP16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 NIFKQ9BYG3 293 aaKnown RBP16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 ADAMTS10Q9H324 1103 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 NOC2LQ9Y3T9 749 aaKnown RBP16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 MTCH2Q9Y6C9 303 aa16.45■□□□□ 0.22
PPP1CA-201ENST00000312989 MUC3AQ02505 3323 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 VTNP04004 478 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 GRB10Q13322 594 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 TMEM266Q2M3C6 531 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 ZNF689Q96CS4 500 aaPredicted RBP16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 MTMR9Q96QG7 549 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 SH2D3AQ9BRG2 576 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 ZBED2Q9BTP6 218 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 TSPYL2Q9H2G4 693 aaPredicted RBP16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 CEP131Q9UPN4 1083 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 INSL6Q9Y581 213 aa16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 COL4A4P53420 1690 aaPredicted RBP16.44■□□□□ 0.22
PPP1CA-201ENST00000312989 GUCY1B3Q02153 619 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 RABEP1Q15276 862 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 KIZQ2M2Z5 673 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 FAM228AQ86W67 206 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 ZNF579Q8NAF0 562 aaKnown RBP16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 BANK1Q8NDB2 785 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 ZSCAN31Q96LW9 406 aaPredicted RBP16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 TBC1D32Q96NH3 1257 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 C17orf80Q9BSJ5 609 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
PPP1CA-201ENST00000312989 MAGEB2O15479 319 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 XKR3Q5GH77 459 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 GDPD5Q8WTR4 605 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 TGS1Q96RS0 853 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 OSMRQ99650 979 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
PPP1CA-201ENST00000312989 UPP2O95045 317 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 CRYBB1P53674 252 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms