RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
SCFD1-201ENST00000311943 GHRP10912 638 aa13.55□□□□□ -0.24
SCFD1-201ENST00000311943 GCFC2P16383 781 aaKnown RBP13.55□□□□□ -0.24
SCFD1-201ENST00000311943 DEFB103AP81534 67 aa13.55□□□□□ -0.24
SCFD1-201ENST00000311943 PTGDRQ13258 359 aa13.55□□□□□ -0.24
SCFD1-201ENST00000311943 FAM160B1Q5W0V3 765 aa13.55□□□□□ -0.24
SCFD1-201ENST00000311943 FAM20AQ96MK3 541 aa13.55□□□□□ -0.24
SCFD1-201ENST00000311943 DDX11L8A8MPP1 907 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 MGAT3Q09327 533 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.247e-8■■□□□ 12.4
SCFD1-201ENST00000311943 BFSP2Q13515 415 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 FAM117BQ6P1L5 589 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 TPH2Q8IWU9 490 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 KIAA0319LQ8IZA0 1049 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 METTL13Q8N6R0 699 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 PIGOQ8TEQ8 1089 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 SNX21Q969T3 373 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 EIF2AK1Q9BQI3 630 aaKnown RBP13.54□□□□□ -0.24
SCFD1-201ENST00000311943 LXNQ9BS40 222 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 SUGCTQ9HAC7 445 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 CDY2AQ9Y6F7 541 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 PTPRSQ13332 1948 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 HBP1O60381 514 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 MED24O75448 989 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 SPATA31C1P0DKV0 1188 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 JAK3P52333 1124 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 CEBPZQ03701 1054 aaKnown RBP13.54□□□□□ -0.24
SCFD1-201ENST00000311943 KIZQ2M2Z5 673 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
SCFD1-201ENST00000311943 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-201ENST00000311943 FGFR4P22455 802 aa13.53□□□□□ -0.24
SCFD1-201ENST00000311943 RBL2Q08999 1139 aa13.53□□□□□ -0.24
SCFD1-201ENST00000311943 LPIN1Q14693 890 aa13.53□□□□□ -0.24
SCFD1-201ENST00000311943 TARBP2Q15633 366 aaKnown RBP13.53□□□□□ -0.24
SCFD1-201ENST00000311943 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
SCFD1-201ENST00000311943 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
SCFD1-201ENST00000311943 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.53□□□□□ -0.24
SCFD1-201ENST00000311943 TBX3O15119 743 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 OR52Z1P0C646 297 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 SFNP31947 248 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 EFCAB12Q6NXP0 572 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 CATSPER3Q86XQ3 398 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 PLIN2Q99541 437 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.24
SCFD1-201ENST00000311943 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 XIRP2A4UGR9 3374 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 GBF1Q92538 1859 aa13.52□□□□□ -0.24
SCFD1-201ENST00000311943 GNAT1P11488 350 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 CD52P31358 61 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
SCFD1-201ENST00000311943 RESTQ13127 1097 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 EPHA7Q15375 998 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 OSMRQ99650 979 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
SCFD1-201ENST00000311943 PSMC5P62195 406 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 MAEAQ7L5Y9 396 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 LINC01465Q8N7H1 131 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 LRRC15Q8TF66 581 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 TMEM143Q96AN5 459 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 PBX4Q9BYU1 374 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 LCHNA4D1U4 455 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 RRN3P2A6NIE6 340 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 CXCL10P02778 98 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 YWHABP31946 246 aaKnown RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 SLC26A2P50443 739 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
SCFD1-201ENST00000311943 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 LINC01599Q8WXQ3 324 aa13.51□□□□□ -0.25
SCFD1-201ENST00000311943 GPR32O75388 356 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 WDR5P61964 334 aaKnown RBP13.5□□□□□ -0.25
SCFD1-201ENST00000311943 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 XKR3Q5GH77 459 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 ZNF484Q5JVG2 852 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
SCFD1-201ENST00000311943 CEP170P1Q96L14 293 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 MMTAG2Q9BU76 263 aaKnown RBP13.5□□□□□ -0.25
SCFD1-201ENST00000311943 CERS4Q9HA82 394 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 CYP26B1Q9NR63 512 aa13.5□□□□□ -0.25
SCFD1-201ENST00000311943 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
SCFD1-201ENST00000311943 NOL7Q9UMY1 257 aaKnown RBP13.5□□□□□ -0.25
SCFD1-201ENST00000311943 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
SCFD1-201ENST00000311943 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
SCFD1-201ENST00000311943 MGEA5O60502 916 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms