RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 MPHOSPH6Q99547 160 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TRIM5Q9C035 493 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PDGFCQ9NRA1 345 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 BMP2KQ9NSY1 1161 aaPredicted RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TBC1D7Q9P0N9 293 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 GABBR1Q9UBS5 961 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TCEAL9Q9UHQ7 104 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 DBR1Q9UK59 544 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 IVNS1ABPQ9Y6Y0 642 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 IGSF9BQ9UPX0 1349 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SZT2Q5T011 3432 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SLC15A5A6NIM6 579 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 GGPS1O95749 300 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 KRT18P05783 430 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PSAPP07602 524 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SUPT20HL2P0C7V6 817 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TGFB3P10600 412 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PTGS1P23219 599 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 YWHABP31946 246 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 RARRES1P49788 294 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SREBF2Q12772 1141 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PSMD2Q13200 908 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 CRHR2Q13324 411 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 LRRC41Q15345 812 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 FAM26FQ5R3K3 315 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 UTP14CQ5TAP6 766 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PLA2G4FQ68DD2 849 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SWSAP1Q6NVH7 229 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TTI2Q6NXR4 508 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 CCDC62Q6P9F0 684 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SFR1Q86XK3 245 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 CCDC65Q8IXS2 484 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SH2D3AQ9BRG2 576 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 KATNBL1Q9H079 304 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 IGKV6D-21A0A0A0MT36 114 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 GSTTP1A0A1W2PQM5 241 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 ARHGEF35A5YM69 484 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 BACH1O14867 736 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 SNAI1O95863 264 aaPredicted RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 ATP4AP20648 1035 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 CCNE1P24864 410 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 CASP5P51878 434 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 NPEPPSP55786 919 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 TPM4P67936 248 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 FANCCQ00597 558 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 MAPK7Q13164 816 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 STIM1Q13586 685 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 NEDD9Q14511 834 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 HERC4Q5GLZ8 1057 aaPredicted RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 MORN1Q5T089 497 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 CDKAL1Q5VV42 579 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 TAPT1Q6NXT6 567 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 MIS18BP1Q6P0N0 1132 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 PADI6Q6TGC4 694 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 MAMDC4Q6UXC1 1216 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 ANO5Q75V66 913 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 Q7L0L9 218 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 TRMT1LQ7Z2T5 733 aaKnown RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 ZNF467Q7Z7K2 595 aaPredicted RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 DAW1Q8N136 415 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 GUF1Q8N442 669 aaKnown RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 COPS5Q92905 334 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 P2RX5Q93086 422 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 DHTKD1Q96HY7 919 aaPredicted RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 MAML3Q96JK9 1138 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 PCYT2Q99447 389 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 DUSP9Q99956 384 aaKnown RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 GTPBP4Q9BZE4 634 aaKnown RBP7.72□□□□□ -1.17
PTCD2-201ENST00000308077 SEMA6BQ9H3T3 888 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 ZHX3Q9H4I2 956 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 ZFYVE28Q9HCC9 887 aa7.72□□□□□ -1.17
PTCD2-201ENST00000308077 SFI1A8K8P3 1242 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 PSMA7O14818 248 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 GUCY2CP25092 1073 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 CTGFP29279 349 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 ZNF131P52739 623 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 PRKCEQ02156 737 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 CELF3Q5SZQ8 465 aaKnown RBP7.71□□□□□ -1.17
PTCD2-201ENST00000308077 ANKRD40Q6AI12 368 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 CENPPQ6IPU0 288 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 METTL7BQ6UX53 244 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 APTXQ7Z2E3 356 aaKnown RBP7.71□□□□□ -1.17
PTCD2-201ENST00000308077 DPP9Q86TI2 863 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 LURAP1LQ8IV03 231 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 ATP6V0A1Q93050 837 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 MRFAP1L1Q96HT8 127 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 FIZ1Q96SL8 496 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 XPO4Q9C0E2 1151 aaKnown RBP7.71□□□□□ -1.17
PTCD2-201ENST00000308077 RRAGDQ9NQL2 400 aaPredicted RBP7.71□□□□□ -1.17
PTCD2-201ENST00000308077 ANKEF1Q9NU02 776 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.71□□□□□ -1.17
PTCD2-201ENST00000308077 KCND2Q9NZV8 630 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 IFNKQ9P0W0 207 aa7.71□□□□□ -1.17
PTCD2-201ENST00000308077 DIS3Q9Y2L1 958 aaKnown RBP7.71□□□□□ -1.17
PTCD2-201ENST00000308077 RBM47A0AV96 593 aaKnown RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 USO1O60763 962 aaKnown RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 HIP1RO75146 1068 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 TBCAO75347 108 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms