RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 SEL1LQ9UBV2 794 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 TCEAL9Q9UHQ7 104 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 USP27XA6NNY8 438 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 B4DLN1 442 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 ARHGAP6O43182 974 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 PEX10O60683 326 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 HOXD13P35453 343 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 COPB2P35606 906 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 ALDH5A1P51649 535 aaPredicted RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 MARSP56192 900 aaKnown RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 MAN2A1Q16706 1144 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 CNGA4Q8IV77 575 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 NELFCDQ8IXH7 590 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 ANKRD35Q8N283 1001 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 BAG1Q99933 345 aaPredicted RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 PARVGQ9HBI0 331 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 TRAF3IP3Q9Y228 551 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 UBE4BO95155 1302 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 SPATA31C2B4DYI2 1134 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 GNA14O95837 355 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 SLC25A27O95847 323 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 TPM1P09493 284 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 MYBP10242 640 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 OSBPP22059 807 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 EDNRBP24530 442 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 ICAM3P32942 547 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 RARRES1P49788 294 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 PSMC5P62195 406 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 MAPK7Q13164 816 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 UGCGQ16739 394 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
TRIM40-205ENST00000307859 SMAP1Q8IYB5 467 aaPredicted RBP13.12□□□□□ -0.31
TRIM40-205ENST00000307859 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 FIZ1Q96SL8 496 aa13.12□□□□□ -0.31
TRIM40-205ENST00000307859 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
TRIM40-205ENST00000307859 PDXKO00764 312 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM40-205ENST00000307859 EIF3JO75822 258 aaKnown RBP13.11□□□□□ -0.31
TRIM40-205ENST00000307859 CASP14P31944 242 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 STXBP2Q15833 593 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 VWA3BQ502W6 1294 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 PADI6Q6TGC4 694 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 NAA15Q9BXJ9 866 aaKnown RBP13.11□□□□□ -0.31
TRIM40-205ENST00000307859 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
TRIM40-205ENST00000307859 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 PCDHA10Q9Y5I2 948 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 SIP14410 1827 aa13.11□□□□□ -0.31
TRIM40-205ENST00000307859 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 HIP1RO75146 1068 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 PRPF6O94906 941 aaKnown RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 GCNT3O95395 438 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 TBC1D8BQ0IIM8 1120 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 NFIL3Q16649 462 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 DAW1Q8N136 415 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 MYCT1Q8N699 235 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 JPH1Q9HDC5 661 aaPredicted RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 TXNRD2Q9NNW7 524 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 RNF225M0QZC1 329 aaPredicted RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 CCP110O43303 1012 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 CALUO43852 315 aaPredicted RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 PPP1R37O75864 691 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 MAPTP10636 758 aaKnown RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 ERCC3P19447 782 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 SYCP1Q15431 976 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
TRIM40-205ENST00000307859 CPLX3Q8WVH0 158 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
TRIM40-205ENST00000307859 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms