RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 TYW1Q9NV66 732 aaKnown RBP12.52□□□□□ -0.4
SCG2-201ENST00000305409 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 A0A1W2PQJ5 194 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 SPDYE16A6NNV3 312 aaPredicted RBP12.52□□□□□ -0.41
SCG2-201ENST00000305409 PDXKO00764 312 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 BACH1O14867 736 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.41
SCG2-201ENST00000305409 TLR2O60603 784 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 SRGAP2O75044 1071 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 RGS20O76081 388 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 PNMA6AP0CW24 399 aaPredicted RBP12.52□□□□□ -0.41
SCG2-201ENST00000305409 BCRP11274 1271 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 FIGNQ5HY92 759 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 ZSWIM2Q8NEG5 633 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.52□□□□□ -0.41
SCG2-201ENST00000305409 ZBTB9Q96C00 473 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
SCG2-201ENST00000305409 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.41
SCG2-201ENST00000305409 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 AKR1B10O60218 316 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 TADA3O75528 432 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 GNA14O95837 355 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 YBX3P16989 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCG2-201ENST00000305409 YWHABP31946 246 aaKnown RBP12.51□□□□□ -0.41
SCG2-201ENST00000305409 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
SCG2-201ENST00000305409 RARRES1P49788 294 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 KIF11P52732 1056 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 CNTN2Q02246 1040 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 UBXN4Q92575 508 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
SCG2-201ENST00000305409 PDCL3Q9H2J4 239 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 ELP3Q9H9T3 547 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCG2-201ENST00000305409 OLFML3Q9NRN5 406 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 GINM1Q9NU53 330 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 K7ENM7 598 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 TRIM49P0CI25 452 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 TRIM49CP0CI26 452 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 XRCC5P13010 732 aaKnown RBP12.51□□□□□ -0.41
SCG2-201ENST00000305409 GAP43P17677 238 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 MLXIPQ9HAP2 919 aa12.51□□□□□ -0.41
SCG2-201ENST00000305409 AJAP1Q9UKB5 411 aaPredicted RBP12.51□□□□□ -0.41
SCG2-201ENST00000305409 IPO7O95373 1038 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 VSIG10LQ86VR7 867 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 ZC3H3Q8IXZ2 948 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 CYP39A1Q9NYL5 469 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 EIF3CLB5ME19 914 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 C19orf81C9J6K1 198 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 ATP1A1P05023 1023 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 KRT83P78385 493 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 SPA17Q15506 151 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 BMT2Q1RMZ1 405 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 FAM102BQ5T8I3 360 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 HGSNATQ68CP4 663 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 SULF1Q8IWU6 871 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 EIF3CQ99613 913 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 NAPGQ99747 312 aaPredicted RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 PAGR1Q9BTK6 254 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCG2-201ENST00000305409 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
SCG2-201ENST00000305409 FHOD1Q9Y613 1164 aa12.5□□□□□ -0.41
SCG2-201ENST00000305409 IRF6O14896 467 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 SLC16A4O15374 487 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 CCND2P30279 289 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 ZNF131P52739 623 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 PEX3P56589 373 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 GHRHRQ02643 423 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 C9orf131Q5VYM1 1079 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 FAM186BQ8IYM0 893 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 CCDC170Q8IYT3 715 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 SLC35C1Q96A29 364 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 GABBR1Q9UBS5 961 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 PCDHA13Q9Y5I0 950 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 LRRN2O75325 713 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 PON1P27169 355 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 EXOC3L4Q17RC7 722 aa12.49□□□□□ -0.41
SCG2-201ENST00000305409 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms