RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 OSBPL1AQ9BXW6 950 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 USP15Q9Y4E8 981 aaPredicted RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 RGPD8O14715 1765 aaPredicted RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 DNAJC8O75937 253 aaPredicted RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 FLT3P36888 993 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 SLC8A3P57103 927 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 SEPT2Q15019 361 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 GSTA5Q7RTV2 222 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 BAP1Q92560 729 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 CEP63Q96MT8 703 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 SRRM3A6NNA2 597 aaPredicted RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 NQO1P15559 274 aaKnown RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 CCND1P24385 295 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 PABPC4Q13310 644 aaKnown RBP eCLIP14.11□□□□□ -0.151e-7■■□□□ 13.3
TRIM35-201ENST00000305364 NLRP3Q96P20 1036 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 TMEM47Q9BQJ4 181 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 DDX23Q9BUQ8 820 aaKnown RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 TMOD4Q9NZQ9 345 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 DNM3Q9UQ16 869 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 MYH15Q9Y2K3 1946 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 RASSF10A6NK89 507 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 LRRN2O75325 713 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 FGFR2P21802 821 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 POLE2P56282 527 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 MAEAQ7L5Y9 396 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 GLYCTKQ8IVS8 523 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 CCDC24Q8N4L8 307 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 MARCH10Q8NA82 808 aaPredicted RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 ZNF526Q8TF50 670 aaPredicted RBP14.11□□□□□ -0.15
TRIM35-201ENST00000305364 SETDB2Q96T68 719 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 PLA2G4BP0C869 781 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 PLCG2P16885 1265 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 LMNB1P20700 586 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
TRIM35-201ENST00000305364 PICALMQ13492 652 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 GRM4Q14833 912 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 CLUL1Q15846 466 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 AGAP11Q8TF27 550 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 NAGPAQ9UK23 515 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 PASKQ96RG2 1323 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 KDM3AQ9Y4C1 1321 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 RIC1Q4ADV7 1423 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 ARHGAP23Q9P227 1491 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 UCHL3P15374 230 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 KRT15P19012 456 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 DRD4P21917 467 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 GSTO1P78417 241 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 XRCC4Q13426 336 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 SNX1Q13596 522 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 KIAA1755Q5JYT7 1200 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 RCSD1Q6JBY9 416 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 SYN2Q92777 582 aaPredicted RBP14.1□□□□□ -0.15
TRIM35-201ENST00000305364 STMN2Q93045 179 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 TMOD2Q9NZR1 351 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 PCDHGC5Q9Y5F6 944 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
TRIM35-201ENST00000305364 KIF3CO14782 793 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 TPCN2Q8NHX9 752 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 ACTRT1Q8TDG2 376 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 PRCCQ92733 491 aaPredicted RBP14.1□□□□□ -0.15
TRIM35-201ENST00000305364 FRMD4BQ9Y2L6 1034 aa14.1□□□□□ -0.15
TRIM35-201ENST00000305364 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 STXBP3O00186 592 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 AGTP01019 485 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 RASSF2P50749 326 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 RAD23BP54727 409 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 GALCP54803 685 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 UBE2SQ16763 222 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 GLIS3Q8NEA6 775 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 ERP44Q9BS26 406 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 PABPC3Q9H361 631 aaKnown RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 MEIS1O00470 390 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 ADAMTS3O15072 1205 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 MYBL1P10243 752 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 CYP2J2P51589 502 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 NPY5RQ15761 445 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 PITPNM3Q9BZ71 974 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 METTL14Q9HCE5 456 aaKnown RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 ABCF3Q9NUQ8 709 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 IFI35P80217 286 aaPredicted RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 GRB10Q13322 594 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 LONRF1Q17RB8 773 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 ZNF572Q7Z3I7 529 aaPredicted RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 SPATA21Q7Z572 469 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 LRRC47Q8N1G4 583 aaKnown RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 FBXO25Q8TCJ0 367 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 EPS8L3Q8TE67 593 aaKnown RBP14.09□□□□□ -0.15
TRIM35-201ENST00000305364 PIK3R5Q8WYR1 880 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 MCUR1Q96AQ8 359 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 TRIM4Q9C037 500 aa14.09□□□□□ -0.15
TRIM35-201ENST00000305364 NPHP3-ACAD11A0A0J9YXS1 232 aa14.08□□□□□ -0.15
TRIM35-201ENST00000305364 NKRFO15226 690 aaKnown RBP eCLIP14.08□□□□□ -0.15
TRIM35-201ENST00000305364 GSTA1P08263 222 aa14.08□□□□□ -0.15
TRIM35-201ENST00000305364 BRAFP15056 766 aa14.08□□□□□ -0.15
TRIM35-201ENST00000305364 ITIH4Q14624 930 aa14.08□□□□□ -0.15
TRIM35-201ENST00000305364 TRIP13Q15645 432 aaPredicted RBP14.08□□□□□ -0.15
TRIM35-201ENST00000305364 WLSQ5T9L3 541 aa14.08□□□□□ -0.15
TRIM35-201ENST00000305364 ZNF365Q70YC5 407 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms