RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 NME8Q8N427 588 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 LENG9Q96B70 501 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 RIT2Q99578 217 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 FTHL17Q9BXU8 183 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 DISC1Q9NRI5 854 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 KCNJ14Q9UNX9 436 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 MTCH2Q9Y6C9 303 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 IGSF9BQ9UPX0 1349 aa12.28□□□□□ -0.44
HMGN1P35-201ENST00000303758 HAX1O00165 279 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 TDP2O95551 362 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 IBSPP21815 317 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 NEK4P51957 841 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 LETM2Q2VYF4 491 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 Q4G0T1 1027 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 METTL13Q8N6R0 699 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 SLC5A5Q92911 643 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 SAMD11Q96NU1 681 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 C17orf80Q9BSJ5 609 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 CELF4Q9BZC1 486 aaKnown RBP12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 MAFBQ9Y5Q3 323 aaPredicted RBP12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 SQORQ9Y6N5 450 aa12.27□□□□□ -0.45
HMGN1P35-201ENST00000303758 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 MARCH6O60337 910 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 OATP04181 439 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 POU3F3P20264 500 aaPredicted RBP12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 ATP4AP20648 1035 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 TMOD1P28289 359 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 PRKCEQ02156 737 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 INF2Q27J81 1249 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 ODR4Q5SWX8 454 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 KRT40Q6A162 431 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 MOXD1Q6UVY6 613 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 FIBCD1Q8N539 461 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 NECAB1Q8N987 351 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 GTF3C6Q969F1 213 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 IL17RAQ96F46 866 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 MAP7D2Q96T17 732 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 PPP1R16BQ96T49 567 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 PHF20Q9BVI0 1012 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 UNC45AQ9H3U1 944 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 AGO3Q9H9G7 860 aaKnown RBP12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 SUGCTQ9HAC7 445 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 NRBP2Q9NSY0 501 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 PADI3Q9ULW8 664 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 AKT3Q9Y243 479 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 KDM3AQ9Y4C1 1321 aa12.26□□□□□ -0.45
HMGN1P35-201ENST00000303758 M0R2N6 131 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 ENPP3O14638 875 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 MAGEB2O15479 319 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 DTNBO60941 627 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 C22orf31O95567 290 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 CTNNB1P35222 781 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 KRT2P35908 639 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 MRPS5P82675 430 aaKnown RBP12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 TRIM29Q14134 588 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 NPY5RQ15761 445 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 ME3Q16798 604 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 RDM1Q8NG50 284 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 GJA10Q969M2 543 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 NAP1L4Q99733 375 aaKnown RBP12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 LMCD1Q9NZU5 365 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 ADGRA3Q8IWK6 1321 aa12.25□□□□□ -0.45
HMGN1P35-201ENST00000303758 CYP3A7-CYP3A51PA0A087WV96 503 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 DENND3A2RUS2 1198 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 ZBTB42B2RXF5 422 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 CCNT1O60563 726 aaKnown RBP12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 LPXNO60711 386 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 PSMD10O75832 226 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 LARGE1O95461 756 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 VTNP04004 478 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 GCFC2P16383 781 aaKnown RBP12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 CYP3A7P24462 503 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 CLCN3P51790 818 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 FOSBP53539 338 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 TTC3P53804 2025 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 BTG3Q14201 252 aaPredicted RBP12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 UGCGQ16739 394 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 PTPROQ16827 1216 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 AAK1Q2M2I8 961 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 KIZQ2M2Z5 673 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 TMEM266Q2M3C6 531 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 EPC2Q52LR7 807 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 PRRC2BQ5JSZ5 2229 aaKnown RBP12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 EFCAB12Q6NXP0 572 aa12.24□□□□□ -0.45
HMGN1P35-201ENST00000303758 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms