RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NFASCO94856 1347 aa21.36■■□□□ 1.01
HOXC4-201ENST00000303406 ZBTB39O15060 712 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 DKC1O60832 514 aaKnown RBP eCLIP21.35■■□□□ 1.01
HOXC4-201ENST00000303406 AFPP02771 609 aaKnown RBP21.35■■□□□ 1.01
HOXC4-201ENST00000303406 RARRES1P49788 294 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 PSMC5P62195 406 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 KCNH2Q12809 1159 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 ZNF569Q5MCW4 686 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.35■■□□□ 1.01
HOXC4-201ENST00000303406 CACNA2D4Q7Z3S7 1137 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 SLC9A9Q8IVB4 645 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 SLC17A8Q8NDX2 589 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 CHST13Q8NET6 341 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 SMCR8Q8TEV9 937 aaPredicted RBP21.35■■□□□ 1.01
HOXC4-201ENST00000303406 DCPSQ96C86 337 aaKnown RBP21.35■■□□□ 1.01
HOXC4-201ENST00000303406 CCDC42Q96M95 316 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 TSGA10Q9BZW7 698 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 PDCL3Q9H2J4 239 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 CGNQ9P2M7 1197 aaKnown RBP21.35■■□□□ 1.01
HOXC4-201ENST00000303406 PTPRFP10586 1907 aa21.35■■□□□ 1.01
HOXC4-201ENST00000303406 GTPBP10A4D1E9 387 aaKnown RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 HIP1RO75146 1068 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 NMT1P30419 496 aaKnown RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 ODR4Q5SWX8 454 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 HS2ST1Q7LGA3 356 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 TXLNBQ8N3L3 684 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 LSM14BQ9BX40 385 aaKnown RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 ST6GALNAC4Q9H4F1 302 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 DMAC2Q9NW81 257 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 CYP39A1Q9NYL5 469 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 PKD2L1Q9P0L9 805 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 LARSQ9P2J5 1176 aaKnown RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 OTOFQ9HC10 1997 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 A0A0U1RQJ8 604 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 CTAGE9A4FU28 777 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 LRRC53A6NM62 1247 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 EFCAB8A8MWE9 144 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 KRT86O43790 486 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 AKAP3O75969 853 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 NOL4O94818 638 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 DDNO94850 711 aaPredicted RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 XRCC5P13010 732 aaKnown RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 VGLL4Q14135 290 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 RRAGAQ7L523 313 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 SULF1Q8IWU6 871 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 SMAP1Q8IYB5 467 aaPredicted RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 DAW1Q8N136 415 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 MNS1Q8NEH6 495 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 ATRIPQ8WXE1 791 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 BORCS6Q96GS4 357 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 IWS1Q96ST2 819 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 IRX2Q9BZI1 471 aaPredicted RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 FHDC1Q9C0D6 1143 aaPredicted RBP21.34■■□□□ 1.01
HOXC4-201ENST00000303406 ARHGAP20Q9P2F6 1191 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 FBXL5Q9UKA1 691 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 MYO6Q9UM54 1294 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 FZD1Q9UP38 647 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 SAMM50Q9Y512 469 aa21.34■■□□□ 1.01
HOXC4-201ENST00000303406 POLR2AP24928 1970 aaKnown RBP21.33■■□□□ 1.01
HOXC4-201ENST00000303406 MYH11P35749 1972 aa21.33■■□□□ 1.01
HOXC4-201ENST00000303406 SFI1A8K8P3 1242 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 PPP1R12BO60237 982 aaPredicted RBP21.33■■□□□ 1
HOXC4-201ENST00000303406 YWHABP31946 246 aaKnown RBP21.33■■□□□ 1
HOXC4-201ENST00000303406 PSMC2P35998 433 aaKnown RBP21.33■■□□□ 1
HOXC4-201ENST00000303406 VAV2P52735 878 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 SNRPFP62306 86 aaKnown RBP21.33■■□□□ 1
HOXC4-201ENST00000303406 SPA17Q15506 151 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 KIAA1328Q86T90 577 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 SLC35F6Q8N357 371 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 NAPGQ99747 312 aaPredicted RBP21.33■■□□□ 1
HOXC4-201ENST00000303406 MOV10L1Q9BXT6 1211 aaKnown RBP21.33■■□□□ 1
HOXC4-201ENST00000303406 GBP3Q9H0R5 595 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 GANQ9H2C0 597 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 TMEM206Q9H813 350 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 CSADQ9Y600 493 aa21.33■■□□□ 1
HOXC4-201ENST00000303406 TESPA1A2RU30 521 aaPredicted RBP21.32■■□□□ 1
HOXC4-201ENST00000303406 ATP9AO75110 1047 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 TADA3O75528 432 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 IREB2P48200 963 aaKnown RBP21.32■■□□□ 1
HOXC4-201ENST00000303406 C12orf56Q8IXR9 622 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 DNERQ8NFT8 737 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 JAKMIP2Q96AA8 810 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 DRC1Q96MC2 740 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 PURBQ96QR8 312 aaKnown RBP21.32■■□□□ 1
HOXC4-201ENST00000303406 BCAS3Q9H6U6 928 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 A1CFQ9NQ94 594 aaKnown RBP21.32■■□□□ 1
HOXC4-201ENST00000303406 RNF181Q9P0P0 153 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 FBXO40Q9UH90 709 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 CDC23Q9UJX2 597 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 DAAM1Q9Y4D1 1078 aa21.32■■□□□ 1
HOXC4-201ENST00000303406 CCNE2O96020 404 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 PLS3P13797 630 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 KCNA2P16389 499 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 TUBB4BP68371 445 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 GNPTABQ3T906 1256 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 SFMBT2Q5VUG0 894 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 LBX2Q6XYB7 198 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 PDCL2Q8N4E4 241 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 CCDC155Q8N6L0 562 aa21.31■■□□□ 1
HOXC4-201ENST00000303406 PROCA1Q8NCQ7 364 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms