RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GSTA4O15217 222 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 CIAO1O76071 339 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 WEE1P30291 646 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 SERPINB6P35237 376 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 TMEM270Q6UE05 265 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 SFR1Q86XK3 245 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 MAP7D3Q8IWC1 876 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 GOLGA5Q8TBA6 731 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 PRIMPOLQ96LW4 560 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 CARMIL3Q8ND23 1372 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 MED7O43513 233 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 KRT3P12035 628 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 ZNF699Q32M78 642 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 RAB44Q7Z6P3 723 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-201ENST00000303354 C11orf96Q7Z7L8 435 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 SNX19Q92543 992 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 ZNF233A6NK53 670 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 DDNO94850 711 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-201ENST00000303354 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 JPH2Q9BR39 696 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-201ENST00000303354 EDEM3Q9BZQ6 932 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 KCNG1Q9UIX4 513 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 MCF2LO15068 1137 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 NOP14P78316 857 aaKnown RBP8.4□□□□□ -1.06
SCN9A-201ENST00000303354 HPCAL4Q9UM19 191 aa8.4□□□□□ -1.06
SCN9A-201ENST00000303354 H0YCG3 227 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 PRRG1O14668 218 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 TDP2O95551 362 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 MMP1P03956 469 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 GTF2A1P52655 376 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-201ENST00000303354 BAATQ14032 418 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-201ENST00000303354 TCP11X2Q5H9J9 407 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 GRK7Q8WTQ7 553 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 MAIP1Q8WWC4 291 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 DYRK4Q9NR20 520 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 RGL1Q9NZL6 768 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-201ENST00000303354 ENDOD1O94919 500 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 ZNF667Q5HYK9 610 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 IL31Q6EBC2 164 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 RFWD2Q8NHY2 731 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 RNF25Q96BH1 459 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-201ENST00000303354 MAPKBP1O60336 1514 aa8.4□□□□□ -1.07
SCN9A-201ENST00000303354 SEC31AO94979 1220 aaKnown RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 THEMIS2Q5TEJ8 643 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 RNF149Q8NC42 400 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 RNF19AQ9NV58 838 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ACOT2P49753 483 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 PRELPP51888 382 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 CSE1LP55060 971 aaKnown RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 BBS9Q3SYG4 887 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 SLC35F6Q8N357 371 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 CCDC33Q8N5R6 958 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 GBP7Q8N8V2 638 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 RAB17Q9H0T7 212 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ANLNQ9NQW6 1124 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 KLHL8Q9P2G9 620 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 CCDC195A0A1B0GUA6 201 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 NNMTP40261 264 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 C11orf57Q6ZUT1 292 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 NSUN7Q8NE18 718 aaKnown RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 TMEM206Q9H813 350 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 SMIM24O75264 130 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 PAK2Q13177 524 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ANKRD40Q6AI12 368 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 OTULINQ96BN8 352 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ATP6V0A4Q9HBG4 840 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 BAIAP2L1Q9UHR4 511 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 PEG3Q9GZU2 1588 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 MYOM2P54296 1465 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 PPP2R2CQ9Y2T4 447 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 PTPRTO14522 1441 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ERVV-1B6SEH8 477 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ATP9BO43861 1147 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 MXI1P50539 228 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ORC1Q13415 861 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 DPCR1Q3MIW9 517 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 CACUL1Q86Y37 369 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 BEST2Q8NFU1 509 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 FAM71BQ8TC56 605 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 GCOM2Q9BZD3 368 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 BAG5Q9UL15 447 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 OAS2P29728 719 aaKnown RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 RFC1P35251 1148 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-201ENST00000303354 KIF19Q2TAC6 998 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 SLC10A5Q5PT55 438 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 ADCK2Q7Z695 626 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 TBC1D16Q8TBP0 767 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 TCP11Q8WWU5 503 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 CDKL2Q92772 493 aa8.39□□□□□ -1.07
SCN9A-201ENST00000303354 CDHR1Q96JP9 859 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms