RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
UBXN1-202ENST00000301935 HLA-CQ95604 372 aa16.98■□□□□ 0.31
UBXN1-202ENST00000301935 LENG9Q96B70 501 aa16.98■□□□□ 0.31
UBXN1-202ENST00000301935 RIT2Q99578 217 aa16.98■□□□□ 0.31
UBXN1-202ENST00000301935 TBC1D22BQ9NU19 505 aa16.98■□□□□ 0.31
UBXN1-202ENST00000301935 ABHD14A-ACY1A0A1B0GW23 586 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 HAS3O00219 553 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 SLC37A4O43826 429 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 GJB5O95377 273 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 ITGB5P18084 799 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 MARCKSP29966 332 aaPredicted RBP16.97■□□□□ 0.31
UBXN1-202ENST00000301935 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
UBXN1-202ENST00000301935 PTK7Q13308 1070 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 LAMC2Q13753 1193 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 MFSD10Q14728 455 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 TCTN1Q2MV58 587 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 ETNPPLQ8TBG4 499 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 GDPD5Q8WTR4 605 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 ZBED2Q9BTP6 218 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 GDPD2Q9HCC8 539 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 KCNH7Q9NS40 1196 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 FBXO2Q9UK22 296 aaPredicted RBP16.97■□□□□ 0.31
UBXN1-202ENST00000301935 PCDHA7Q9UN72 937 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 PCDHA12Q9UN75 941 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
UBXN1-202ENST00000301935 MSH4O15457 936 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 SLC26A4O43511 780 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 HOXD8P13378 290 aaPredicted RBP16.96■□□□□ 0.31
UBXN1-202ENST00000301935 CMA1P23946 247 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 PLA2G5P39877 138 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.31
UBXN1-202ENST00000301935 SKOR2Q2VWA4 1001 aaPredicted RBP16.96■□□□□ 0.31
UBXN1-202ENST00000301935 TRAF7Q6Q0C0 670 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.31
UBXN1-202ENST00000301935 SLC5A5Q92911 643 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 WNT8BQ93098 351 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 SENP7Q9BQF6 1050 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 ZNF577Q9BSK1 485 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 LMBRD1Q9NUN5 540 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 LMCD1Q9NZU5 365 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 TCEAL9Q9UHQ7 104 aa16.96■□□□□ 0.31
UBXN1-202ENST00000301935 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 IPO5O00410 1097 aaKnown RBP16.95■□□□□ 0.3
UBXN1-202ENST00000301935 EFCAB14O75071 495 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 RGS20O76081 388 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 TXKP42681 527 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
UBXN1-202ENST00000301935 CYP2W1Q8TAV3 490 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 HAS1Q92839 578 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 RAD9AQ99638 391 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
UBXN1-202ENST00000301935 TTC12Q9H892 705 aaPredicted RBP16.95■□□□□ 0.3
UBXN1-202ENST00000301935 AGO4Q9HCK5 861 aaKnown RBP16.95■□□□□ 0.3
UBXN1-202ENST00000301935 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 NFASCO94856 1347 aa16.95■□□□□ 0.3
UBXN1-202ENST00000301935 LINC01553A4QN01 128 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 MBD3O95983 291 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 ARP10275 920 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 TXLNAP40222 546 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 ERVK-21P61565 698 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 IKBKEQ14164 716 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 ZNF618Q5T7W0 954 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 LRCH2Q5VUJ6 765 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
UBXN1-202ENST00000301935 TEKT3Q9BXF9 490 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 SUGCTQ9HAC7 445 aa16.94■□□□□ 0.3
UBXN1-202ENST00000301935 GAS7O60861 476 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 PSMD10O75832 226 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 NEDD9Q14511 834 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 HSDL1Q3SXM5 330 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 RESP18Q5W5W9 173 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 KCTD17Q8N5Z5 321 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 ERMNQ8TAM6 284 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 SPATA33Q96N06 139 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 EPHX3Q9H6B9 360 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
UBXN1-202ENST00000301935 RBAK-RBAKDNI3L0D1 243 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 SORBS3O60504 671 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 PPFIA4O75335 1185 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 LGR5O75473 907 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 GGPS1O95749 300 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 UBA1P22314 1058 aaKnown RBP16.92■□□□□ 0.3
UBXN1-202ENST00000301935 TECP42680 631 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-202ENST00000301935 KRT76Q01546 638 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 PPP2R5CQ13362 524 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-202ENST00000301935 HIC1Q14526 733 aa16.92■□□□□ 0.3
UBXN1-202ENST00000301935 CELF3Q5SZQ8 465 aaKnown RBP16.92■□□□□ 0.3
UBXN1-202ENST00000301935 CCDC73Q6ZRK6 1079 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms