RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 GINS2Q9Y248 185 aa17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 GRIN3BO60391 1043 aa17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 CASP1P29466 404 aa17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 CDC37Q16543 378 aaPredicted RBP17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 PDIK1LQ8N165 341 aa17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 CYTH2Q99418 400 aa17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
SNAPC4-201ENST00000298532 TESPA1A2RU30 521 aaPredicted RBP17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 HNRNPDLO14979 420 aaKnown RBP17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 BASP1P80723 227 aaKnown RBP17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 GABPAQ06546 454 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 RASA4BC9J798 803 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 RASA4O43374 803 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 TOM1L1O75674 476 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 TRAIPQ9BWF2 469 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 LOC102724159A0A0B4J2E5 919 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 A0A0G2JND7 137 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 EIF3HO15372 352 aaKnown RBP eCLIP17.71■□□□□ 0.435e-6■■□□□ 13.3
SNAPC4-201ENST00000298532 MXI1P50539 228 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 MTF1Q14872 753 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 PWP2Q15269 919 aaKnown RBP17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 FAM167BQ9BTA0 163 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 EPN3Q9H201 632 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 SEPT10Q9P0V9 454 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
SNAPC4-201ENST00000298532 PDHA1P08559 390 aa17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 GFPT1Q06210 699 aaPredicted RBP17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 BBS9Q3SYG4 887 aa17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 TRIML2Q8N7C3 387 aa17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 LRRC37BQ96QE4 947 aa17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 DNAJC17Q9NVM6 304 aaKnown RBP17.71■□□□□ 0.42
SNAPC4-201ENST00000298532 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 GUCY1A3Q02108 690 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 EN1Q05925 392 aaPredicted RBP17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 DPF2Q92785 391 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 PIGSQ96S52 555 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 CXorf56Q9H5V9 222 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 ETNK1Q9HBU6 452 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 NEXMIFQ5QGS0 1516 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 A6NJR5 290 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 CAV1Q03135 178 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 ICA1Q05084 483 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 NACC1Q96RE7 527 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 SLITRK6Q9H5Y7 841 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 ZFP69BQ9UJL9 534 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 ACTN1P12814 892 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 IREB2P48200 963 aaKnown RBP17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 DYNLL1P63167 89 aaKnown RBP17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 TSGA10IPQ3SY00 556 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 CALR3Q96L12 384 aaKnown RBP17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■■■□ 21.8
SNAPC4-201ENST00000298532 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 NCK2O43639 380 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 CYP19A1P11511 503 aaPredicted RBP17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 SEMA3FQ13275 785 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 ARHGAP18Q8N392 663 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 BATF3Q9NR55 127 aa17.7■□□□□ 0.42
SNAPC4-201ENST00000298532 OSBPP22059 807 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 MDH1P40925 334 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 HDAC11Q96DB2 347 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 SH3GL3Q99963 347 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 DNAJC24Q6P3W2 148 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 RAPH1Q70E73 1250 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 EPM2AIP1Q7L775 607 aaPredicted RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 MXD3Q9BW11 206 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 DDX47Q9H0S4 455 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 MRPL46Q9H2W6 279 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 TECPR2O15040 1411 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 FBXW10Q5XX13 1052 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 CRLF3Q8IUI8 442 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 SRRM1Q8IYB3 904 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 THOC1Q96FV9 657 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 IRX2Q9BZI1 471 aaPredicted RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 PPARGC1AQ9UBK2 798 aaKnown RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 SCNN1DP51172 638 aa17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
SNAPC4-201ENST00000298532 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 FAM187AA6NFU0 413 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 HAUS5O94927 633 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 RCAN1P53805 252 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 PDCD2Q16342 344 aaPredicted RBP17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 SUSD4Q5VX71 490 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 GLG1Q92896 1179 aa17.68■□□□□ 0.42
SNAPC4-201ENST00000298532 CCDC138Q96M89 665 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms