RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 ZBED3Q96IU2 234 aaPredicted RBP21.68■■□□□ 1.06
NFIL3-201ENST00000297689 SMARCAL1Q9NZC9 954 aa21.68■■□□□ 1.06
NFIL3-201ENST00000297689 PALMO75781 387 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 GAP43P17677 238 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 PTK2Q05397 1052 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 KCNA1Q09470 495 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 CCDC70Q6NSX1 233 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 ZNF571Q7Z3V5 609 aaPredicted RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 AGBL3Q8NEM8 1001 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 FIZ1Q96SL8 496 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 PACSIN1Q9BY11 444 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 PIM2Q9P1W9 311 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 PGAP2Q9UHJ9 254 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 BZW2Q9Y6E2 419 aaKnown RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 ATP8B3O60423 1300 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 ZMYM2Q9UBW7 1377 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 GTPBP10A4D1E9 387 aaKnown RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 EIF3DO15371 548 aaKnown RBP eCLIP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 XRCC5P13010 732 aaKnown RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 PAFAH1B1P43034 410 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 CASP4P49662 377 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 EXOC3L4Q17RC7 722 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 GLE1Q53GS7 698 aaKnown RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 C10orf76Q5T2E6 689 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 B3GNT9Q6UX72 402 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 RBM46Q8TBY0 533 aaKnown RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 PSMB7Q99436 277 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 TMEM39BQ9GZU3 492 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 RANBP17Q9H2T7 1088 aaKnown RBP21.67■■□□□ 1.06
NFIL3-201ENST00000297689 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
NFIL3-201ENST00000297689 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
NFIL3-201ENST00000297689 FER1L6Q2WGJ9 1857 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 SHTN1A0MZ66 631 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 PLA2G6O60733 806 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 MUTP22033 750 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 RPL13P26373 211 aaKnown RBP21.66■■□□□ 1.06
NFIL3-201ENST00000297689 ZNF76P36508 570 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 EPS15P42566 896 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 JAM2P57087 298 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 KIAA0753Q2KHM9 967 aa21.66■■□□□ 1.06
NFIL3-201ENST00000297689 RBM12Q9NTZ6 932 aaKnown RBP21.66■■□□□ 1.06
NFIL3-201ENST00000297689 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.66■■□□□ 1.06
NFIL3-201ENST00000297689 TNNT3P45378 269 aaPredicted RBP21.65■■□□□ 1.06
NFIL3-201ENST00000297689 LMAN1P49257 510 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 FKBP1CQ5VVH2 108 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 INPP4AQ96PE3 977 aaPredicted RBP21.65■■□□□ 1.06
NFIL3-201ENST00000297689 ARHGEF10LQ9HCE6 1279 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 STIM2Q9P246 746 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 ZBTB21Q9ULJ3 1066 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 GRID2IPA4D2P6 1211 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 RNF40O75150 1001 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 RPS6KA5O75582 802 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 ANXA13P27216 316 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 ZNF131P52739 623 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 ARID5AQ03989 594 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 CTTNQ14247 550 aaKnown RBP21.65■■□□□ 1.06
NFIL3-201ENST00000297689 CFAP221Q4G0U5 840 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 SLC30A10Q6XR72 485 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 MS4A14Q96JA4 679 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 DEFB129Q9H1M3 183 aa21.65■■□□□ 1.06
NFIL3-201ENST00000297689 TBCAO75347 108 aaKnown RBP21.64■■□□□ 1.05
NFIL3-201ENST00000297689 GCNT3O95395 438 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 CCDC181Q5TID7 509 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 PIGOQ8TEQ8 1089 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 ZBTB9Q96C00 473 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 DYDC2Q96IM9 177 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 POLD4Q9HCU8 107 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 AJAP1Q9UKB5 411 aaPredicted RBP21.64■■□□□ 1.05
NFIL3-201ENST00000297689 CD2APQ9Y5K6 639 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 PHACTR2O75167 634 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 ACTN2P35609 894 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 NBPF9Q3BBW0 867 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 LRCH2Q5VUJ6 765 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 MIGA2Q7L4E1 593 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 OLIG1Q8TAK6 271 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 GDAP1L1Q96MZ0 367 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.64■■□□□ 1.05
NFIL3-201ENST00000297689 NAGPAQ9UK23 515 aa21.64■■□□□ 1.05
NFIL3-201ENST00000297689 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
NFIL3-201ENST00000297689 CES2O00748 559 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 TBC1D12O60347 775 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 CFBP00751 764 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 ZBTB48P10074 688 aaPredicted RBP21.63■■□□□ 1.05
NFIL3-201ENST00000297689 EPB41P11171 864 aaKnown RBP21.63■■□□□ 1.05
NFIL3-201ENST00000297689 GGCXP38435 758 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 GBP6Q6ZN66 633 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 GOLGA5Q8TBA6 731 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 DMAC2Q9NW81 257 aa21.63■■□□□ 1.05
NFIL3-201ENST00000297689 FRMPD4Q14CM0 1322 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 SFI1A8K8P3 1242 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 ZBTB39O15060 712 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 FTCDO95954 541 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 SLC7A5Q01650 507 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 ZSCAN26Q16670 478 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 CEP55Q53EZ4 464 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 DALRD3Q5D0E6 543 aaKnown RBP21.62■■□□□ 1.05
NFIL3-201ENST00000297689 FAM83AQ86UY5 434 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 LRRC57Q8N9N7 239 aa21.62■■□□□ 1.05
NFIL3-201ENST00000297689 CAVIN3Q969G5 261 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms