RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 PCGF5Q86SE9 256 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 KLHL29Q96CT2 875 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 NGRNQ9NPE2 291 aaKnown RBP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 A0A1W2PQ27 194 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 A0A1W2PQ64 194 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 A0A1W2PQD8 194 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 TDP2O95551 362 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 HIBCHQ6NVY1 386 aaPredicted RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 FMO2Q99518 471 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 MAGOHP61326 146 aaKnown RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 PHEXP78562 749 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 TTLL11Q8NHH1 800 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 ZNF277Q9NRM2 450 aaPredicted RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 PRPF3O43395 683 aaKnown RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 KCTD2Q14681 263 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 RGS9BPQ6ZS82 235 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 RAPGEF5Q92565 580 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 CELF1Q92879 486 aaKnown RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 PRPSAP2O60256 369 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 S100BP04271 92 aaPredicted RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 NFX1Q12986 1120 aaKnown RBP16.61■□□□□ 0.25
FNDC1-201ENST00000297267 PPP2R5EQ16537 467 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 CCDC33Q8N5R6 958 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 HADHAP40939 763 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 RHPN2Q8IUC4 686 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 RCOR1Q9UKL0 485 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 KCNA1Q09470 495 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 SLC30A5Q8TAD4 765 aa16.61■□□□□ 0.25
FNDC1-201ENST00000297267 TRIM49P0CI25 452 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 TRIM49CP0CI26 452 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 SEPT2Q15019 361 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 IQCB1Q15051 598 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 TMEM270Q6UE05 265 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 PYROXD1Q8WU10 500 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 RASGRF2O14827 1237 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 ADORA2BP29275 332 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 KCNF1Q9H3M0 494 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 TMEM94Q12767 1356 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 KCNQ2O43526 872 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 MMEP08473 750 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 ART3Q13508 389 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 ABI1Q8IZP0 508 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 CYP4F11Q9HBI6 524 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 COASYQ13057 564 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 DDX47Q9H0S4 455 aaKnown RBP16.6■□□□□ 0.25
FNDC1-201ENST00000297267 FBXL5Q9UKA1 691 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
FNDC1-201ENST00000297267 RFWD2Q8NHY2 731 aa16.6■□□□□ 0.25
FNDC1-201ENST00000297267 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
FNDC1-201ENST00000297267 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.6■□□□□ 0.25
FNDC1-201ENST00000297267 CUL4AQ13619 759 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 TRIM67Q6ZTA4 783 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 CDKL2Q92772 493 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 TMEM62Q0P6H9 643 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 AP1B1Q10567 949 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 CACYBPQ9HB71 228 aaKnown RBP16.59■□□□□ 0.25
FNDC1-201ENST00000297267 MED4Q9NPJ6 270 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 LCP1P13796 627 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 RPGRIP1Q96KN7 1286 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 RPF1Q9H9Y2 349 aaKnown RBP16.59■□□□□ 0.25
FNDC1-201ENST00000297267 COPB2P35606 906 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 MXI1P50539 228 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 SRRM1Q8IYB3 904 aaKnown RBP16.59■□□□□ 0.25
FNDC1-201ENST00000297267 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 LRFN2Q9ULH4 789 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 PNMA6FA0A0J9YX94 578 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 PFDN1O60925 122 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 CRKP46108 304 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 ZDHHC9Q9Y397 364 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
FNDC1-201ENST00000297267 KRT26Q7Z3Y9 468 aa16.58■□□□□ 0.25
FNDC1-201ENST00000297267 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.25
FNDC1-201ENST00000297267 NACC1Q96RE7 527 aa16.58■□□□□ 0.25
FNDC1-201ENST00000297267 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.25
FNDC1-201ENST00000297267 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 ATICP31939 592 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 PHLDB3Q6NSJ2 640 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 OR2W6PQ8NHA6 318 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 IWS1Q96ST2 819 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 GPSM2P81274 684 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 GUCY1A3Q02108 690 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 APBA1Q02410 837 aa16.58■□□□□ 0.24
FNDC1-201ENST00000297267 ZC3H18Q86VM9 953 aaKnown RBP16.58■□□□□ 0.24
FNDC1-201ENST00000297267 PRMT1Q99873 361 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms