RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 SMARCA1P28370 1054 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 CTNNA1P35221 906 aaKnown RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 PRPHP41219 470 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 XRCC4Q13426 336 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 ECM1Q16610 540 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 PNMA8AQ86V59 439 aaPredicted RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 LARGE2Q8N3Y3 721 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 CUL5Q93034 780 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 NOX5Q96PH1 765 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 IDI2Q9BXS1 227 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 TRIM9Q9C026 710 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 KANSL2Q9H9L4 492 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 SLC12A6Q9UHW9 1150 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 LAD1O00515 517 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 CLTAP09496 248 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 ZKSCAN8Q15776 578 aaPredicted RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 RAPGEF5Q92565 580 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 MTMR9Q96QG7 549 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 PYM1Q9BRP8 204 aaKnown RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 RIC8AQ9NPQ8 531 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 DDX25Q9UHL0 483 aaKnown RBP13.62□□□□□ -0.23
CAGE1-201ENST00000296742 SERPINA10Q9UK55 444 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 PLAGL2Q9UPG8 496 aa13.62□□□□□ -0.23
CAGE1-201ENST00000296742 RAD51CO43502 376 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 MGRN1O60291 552 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 HOXA13P31271 388 aaPredicted RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 HSD17B3P37058 310 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 ELF3P78545 371 aaPredicted RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 GRB10Q13322 594 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 BYSLQ13895 437 aaKnown RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 SLC30A10Q6XR72 485 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 RRAGAQ7L523 313 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 CCDC17Q96LX7 622 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 DUSP9Q99956 384 aaKnown RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 KIF9Q9HAQ2 790 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 NOVA2Q9UNW9 492 aaKnown RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 ESYT2A0FGR8 921 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 NDUFB10O96000 172 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 DPEP1P16444 411 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 CDK17Q00537 523 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 PROCA1Q8NCQ7 364 aaPredicted RBP13.61□□□□□ -0.23
CAGE1-201ENST00000296742 GLIS3Q8NEA6 775 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 ARMC2Q8NEN0 867 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 SNX29Q8TEQ0 813 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 L3MBTL1Q9Y468 752 aa13.61□□□□□ -0.23
CAGE1-201ENST00000296742 EME2A4GXA9 379 aaPredicted RBP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 DDX42Q86XP3 938 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 ACER1Q8TDN7 264 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 UBLCP1Q8WVY7 318 aaPredicted RBP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 HAS1Q92839 578 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 CALML4Q96GE6 196 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 LRRC53A6NM62 1247 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 HSPA9P38646 679 aaKnown RBP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 STAT3P40763 770 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 PPP2R2AP63151 447 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 TTLL6Q8N841 843 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 ZNF483Q8TF39 744 aaPredicted RBP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 TMEM39BQ9GZU3 492 aa13.6□□□□□ -0.23
CAGE1-201ENST00000296742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAGE1-201ENST00000296742 MYMKA6NI61 221 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 PALMO75781 387 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 HMGB2P26583 209 aaKnown RBP13.59□□□□□ -0.23
CAGE1-201ENST00000296742 SLC8A3P57103 927 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 EHHADHQ08426 723 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 LRRC41Q15345 812 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 NBPF9Q3BBW0 867 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 TATDN1Q6P1N9 297 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 CCT6BQ92526 530 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 AK8Q96MA6 479 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 PLCB1Q9NQ66 1216 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
CAGE1-201ENST00000296742 RHOBTB3O94955 611 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 MAGOHP61326 146 aaKnown RBP13.59□□□□□ -0.23
CAGE1-201ENST00000296742 GRIK3Q13003 919 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 C11orf91Q3C1V1 193 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
CAGE1-201ENST00000296742 CC2D2BQ6DHV5 1058 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 GIMAP8Q8ND71 665 aaPredicted RBP13.59□□□□□ -0.23
CAGE1-201ENST00000296742 C1orf131Q8NDD1 294 aaKnown RBP13.59□□□□□ -0.23
CAGE1-201ENST00000296742 LMBR1Q8WVP7 490 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 TATDN2Q93075 761 aa13.59□□□□□ -0.23
CAGE1-201ENST00000296742 P2RX5Q93086 422 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms