RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 NXNQ6DKJ4 435 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 LPCAT2Q7L5N7 544 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 RASGRP2Q7LDG7 609 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 HORMAD1Q86X24 394 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 RHPN1Q8TCX5 695 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 CCDC127Q96BQ5 260 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 HAO1Q9UJM8 370 aa12.58□□□□□ -0.4
SNIP1-201ENST00000296215 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 TJP3O95049 919 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 CASP5P51878 434 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 ITGA9Q13797 1035 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 KRT31Q15323 416 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 IFIT3O14879 490 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 ASAP2O43150 1006 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 WBP4O75554 376 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SCG2P13521 617 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 RAPGEF1Q13905 1077 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SUZ12Q15022 739 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SGSM1Q2NKQ1 1148 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 RARS2Q5T160 578 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 TMEM214Q6NUQ4 689 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 TOR1AIP2Q8NFQ8 470 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 NSMCE3Q96MG7 304 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 ACAP3Q96P50 834 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 STK33Q9BYT3 514 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 KLHL41O60662 606 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 DHX32Q7L7V1 743 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 PTPRN2Q92932 1015 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 PPWD1Q96BP3 646 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 RSPH9Q9H1X1 276 aaPredicted RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 TBK1Q9UHD2 729 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 GOLGA8MH3BSY2 632 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SMU1Q2TAY7 513 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 PCNX4Q63HM2 1172 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 RRAGAQ7L523 313 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 CCDC103Q8IW40 242 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 PALM2Q8IXS6 379 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 NAT14Q8WUY8 206 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 HPS1Q92902 700 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 SPATA16Q9BXB7 569 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 OSBPL7Q9BZF2 842 aa12.57□□□□□ -0.4
SNIP1-201ENST00000296215 TTC7AQ9ULT0 858 aaPredicted RBP12.57□□□□□ -0.4
SNIP1-201ENST00000296215 PABPN1LA6NDY0 278 aaKnown RBP12.56□□□□□ -0.4
SNIP1-201ENST00000296215 LPIN1Q14693 890 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 PTPROQ16827 1216 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 LACTB2Q53H82 288 aaPredicted RBP12.56□□□□□ -0.4
SNIP1-201ENST00000296215 TC2NQ8N9U0 490 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 BOLA2-SMG1P6H3BVE0 249 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
SNIP1-201ENST00000296215 CSPG5O95196 566 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 FYNP06241 537 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 CCNCP24863 283 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 UBA7P41226 1012 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 PPARAQ07869 468 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 SPARCL1Q14515 664 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 TTMPQ5BVD1 217 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 RAD9BQ6WBX8 426 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 C14orf80Q86SX3 495 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 TMBIM4Q9HC24 238 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 TRPV5Q9NQA5 729 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 CTNNAL1Q9UBT7 734 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 DCTN4Q9UJW0 460 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 COQ6Q9Y2Z9 468 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 NLRP1Q9C000 1473 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 DNM2P50570 870 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 EPHB1P54762 984 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 TLDC1Q6P9B6 456 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 RBM44Q6ZP01 1051 aaKnown RBP12.56□□□□□ -0.4
SNIP1-201ENST00000296215 SYCE1Q8N0S2 351 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 MMGT1Q8N4V1 131 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
SNIP1-201ENST00000296215 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
SNIP1-201ENST00000296215 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
SNIP1-201ENST00000296215 LRRIQ4A6NIV6 560 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 EIF3FO00303 357 aaPredicted RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 SEC24DO94855 1032 aaPredicted RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 CTNNA2P26232 953 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 RPL13P26373 211 aaKnown RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 RXFP1Q9HBX9 757 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 BRAFP15056 766 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 TWF2Q6IBS0 349 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms