RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 RARRES1P49788 294 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 MTERF2Q49AM1 385 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 IQUBQ8NA54 791 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 ENGASEQ8NFI3 743 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 RAD54LQ92698 747 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 EVPLQ92817 2033 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 BHMT2Q9H2M3 363 aa30.95■■■□□ 2.54
CHCHD4-201ENST00000295767 ZBTB42B2RXF5 422 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 EN2P19622 333 aaPredicted RBP30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 FAM160A1Q05DH4 1040 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 PPFIA1Q13136 1202 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 ITGA7Q13683 1181 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 XKR9Q5GH70 373 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 FMR1NBQ8N0W7 255 aaPredicted RBP30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 C7orf31Q8N865 590 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 TRAPPC12Q8WVT3 735 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 LARP4BQ92615 738 aaKnown RBP30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 CEP170P1Q96L14 293 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 CYP26B1Q9NR63 512 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 HDAC6Q9UBN7 1215 aa30.94■■■□□ 2.54
CHCHD4-201ENST00000295767 SNW1Q13573 536 aaKnown RBP30.93■■■□□ 2.54
CHCHD4-201ENST00000295767 TARBP2Q15633 366 aaKnown RBP30.93■■■□□ 2.54
CHCHD4-201ENST00000295767 PYM1Q9BRP8 204 aaKnown RBP30.93■■■□□ 2.54
CHCHD4-201ENST00000295767 SENP6Q9GZR1 1112 aaPredicted RBP30.93■■■□□ 2.54
CHCHD4-201ENST00000295767 DNAH12Q6ZR08 3092 aa30.93■■■□□ 2.54
CHCHD4-201ENST00000295767 PLA2G4BP0C869 781 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 COL6A1P12109 1028 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 MCM6Q14566 821 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 GRIK4Q16099 956 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 CCDC43Q96MW1 224 aaKnown RBP30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 CEP89Q96ST8 783 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 SETD4Q9NVD3 440 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 COL1A2P08123 1366 aa30.92■■■□□ 2.54
CHCHD4-201ENST00000295767 A0A0U1RQG5 324 aaPredicted RBP30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 NR1I2O75469 434 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 ZNF202O95125 648 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 IGBP1P78318 339 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 FAM47CQ5HY64 1035 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 ZNF484Q5JVG2 852 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 NFRKBQ6P4R8 1299 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 LMBR1Q8WVP7 490 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 PAWRQ96IZ0 340 aaKnown RBP30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 SERTAD1Q9UHV2 236 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 NRCAMQ92823 1304 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 ARHGEF35A5YM69 484 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 ACTN4O43707 911 aaKnown RBP30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 SSBP05455 408 aaKnown RBP eCLIP30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 SLC12A3P55017 1021 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 HIC1Q14526 733 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 DHX8Q14562 1220 aaKnown RBP30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 LONRF3Q496Y0 759 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 SYT2Q8N9I0 419 aaPredicted RBP30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 CUEDC2Q9H467 287 aa30.91■■■□□ 2.54
CHCHD4-201ENST00000295767 HOXC8P31273 242 aa30.9■■■□□ 2.54
CHCHD4-201ENST00000295767 SESTD1Q86VW0 696 aa30.9■■■□□ 2.54
CHCHD4-201ENST00000295767 TNS4Q8IZW8 715 aa30.9■■■□□ 2.54
CHCHD4-201ENST00000295767 GTF2IRD1Q9UHL9 959 aa30.9■■■□□ 2.54
CHCHD4-201ENST00000295767 SLC43A3Q8NBI5 491 aa30.89■■■□□ 2.54
CHCHD4-201ENST00000295767 C11orf49Q9H6J7 331 aa30.89■■■□□ 2.54
CHCHD4-201ENST00000295767 MYH11P35749 1972 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 C17orf102A2RUQ5 167 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 RRN3P2A6NIE6 340 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 SLFN14P0C7P3 912 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 MARCH8Q5T0T0 291 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 ZBTB10Q96DT7 871 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 BMP2KQ9NSY1 1161 aaPredicted RBP30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 USP25Q9UHP3 1055 aa30.88■■■□□ 2.53
CHCHD4-201ENST00000295767 ARVCFO00192 962 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 USO1O60763 962 aaKnown RBP30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 ADAM17P78536 824 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 GDF6Q6KF10 455 aaPredicted RBP30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 PADI6Q6TGC4 694 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 KRBA2Q6ZNG9 492 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 CEP57L1Q8IYX8 460 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 GPT2Q8TD30 523 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 DACT1Q9NYF0 836 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 PPME1Q9Y570 386 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 ZNF200P98182 395 aaPredicted RBP30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 PTPN11Q06124 597 aaPredicted RBP30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 TBC1D8BQ0IIM8 1120 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 SV2BQ7L1I2 683 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 STAMQ92783 540 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 RUSC1Q9BVN2 902 aa30.87■■■□□ 2.53
CHCHD4-201ENST00000295767 C22orf31O95567 290 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 ATN1P54259 1190 aaPredicted RBP30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 RINT1Q6NUQ1 792 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 MTHFD1LQ6UB35 978 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 NECAB2Q7Z6G3 386 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 GPBP1Q86WP2 473 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 CNNM3Q8NE01 707 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 MTRQ99707 1265 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 DHX33Q9H6R0 707 aaKnown RBP30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 MAGEF1Q9HAY2 307 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 KBTBD4Q9NVX7 518 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 TUBE1Q9UJT0 475 aa30.86■■■□□ 2.53
CHCHD4-201ENST00000295767 KLRC1P26715 233 aa30.85■■■□□ 2.53
CHCHD4-201ENST00000295767 RFC5P40937 340 aa30.85■■■□□ 2.53
CHCHD4-201ENST00000295767 CDK7P50613 346 aa30.85■■■□□ 2.53
CHCHD4-201ENST00000295767 POLGP54098 1239 aaPredicted RBP30.85■■■□□ 2.53
CHCHD4-201ENST00000295767 SOX10P56693 466 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms