RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 STBD1O95210 358 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 SLU7O95391 586 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 HOXD13P35453 343 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 ALDH5A1P51649 535 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 ERVK-24P63145 666 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 ZBED6P86452 979 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 RBM10P98175 930 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 EDRF1Q3B7T1 1238 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 MTERF4Q7Z6M4 381 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 SMAP1Q8IYB5 467 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 SLC10A4Q96EP9 437 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 FGD4Q96M96 766 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 SEL1LQ9UBV2 794 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 UBE4BO95155 1302 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 A0A1W2PQJ5 194 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 SOWAHBA6NEL2 793 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 WDR64B1ANS9 1081 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 EIF3JO75822 258 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 ATG7O95352 703 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 CASQ1P31415 396 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 QARSP47897 775 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 MAPK7Q13164 816 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 PLS1Q14651 629 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 NFIL3Q16649 462 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 MAP1SQ66K74 1059 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 SFR1Q86XK3 245 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 PIGOQ8TEQ8 1089 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 TMEM174Q8WUU8 243 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 TSC1Q92574 1164 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 TTYH3Q9C0H2 523 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 L2HGDHQ9H9P8 463 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 TRAF3IP3Q9Y228 551 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 ZBTB39O15060 712 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 CETN3O15182 167 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDPN-201ENST00000294489 KIF5CO60282 957 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 ARHGAP29Q52LW3 1261 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 MRPL44Q9H9J2 332 aaKnown RBP10.08□□□□□ -0.8
PDPN-201ENST00000294489 LZTFL1Q9NQ48 299 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 ANKEF1Q9NU02 776 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 SOCS7O14512 581 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 FAM13AO94988 1023 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 MAPTP10636 758 aaKnown RBP10.08□□□□□ -0.8
PDPN-201ENST00000294489 PSMC5P62195 406 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 CNTN2Q02246 1040 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 ADAM9Q13443 819 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 STXBP2Q15833 593 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 KNOP1Q1ED39 458 aaKnown RBP10.08□□□□□ -0.8
PDPN-201ENST00000294489 ANKRD23Q86SG2 305 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 ERO1AQ96HE7 468 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 MROH8Q9H579 483 aa10.08□□□□□ -0.8
PDPN-201ENST00000294489 EPN1Q9Y6I3 576 aaPredicted RBP10.08□□□□□ -0.8
PDPN-201ENST00000294489 TESPA1A2RU30 521 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 CALUO43852 315 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 PEX10O60683 326 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 URI1O94763 535 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 CETPP11597 493 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ERCC3P19447 782 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 CASP5P51878 434 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 GTF2A2P52657 109 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 UGCGQ16739 394 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 Q3C1V9 767 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 MMRN2Q9H8L6 949 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 RRAGCQ9HB90 399 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 AGPAT5Q9NUQ2 364 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 MYH9P35579 1960 aaKnown RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 RSPH10B2B2RC85 870 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 PPP1R37O75864 691 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 NDUFA10O95299 355 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 IPO7O95373 1038 aaKnown RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 GCNT3O95395 438 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 RSPH10BP0C881 870 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 CYLC1P35663 651 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 RARRES1P49788 294 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 KLK7P49862 253 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 MEA1Q16626 185 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 GNPTABQ3T906 1256 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ABHD15Q6UXT9 468 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 DAW1Q8N136 415 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ANKRD35Q8N283 1001 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 CHP1Q99653 195 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 R3HDMLQ9H3Y0 253 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 GBA2Q9HCG7 927 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 PNMA3Q9UL41 463 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 FAM184BQ9ULE4 1060 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 PCDHA10Q9Y5I2 948 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDPN-201ENST00000294489 IGKV6D-21A0A0A0MT36 114 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 DDX39AO00148 427 aaKnown RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 PDXKO00764 312 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 NR2F2P24468 414 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 RPL13P26373 211 aaKnown RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 KRT83P78385 493 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 SP2Q02086 613 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 FSTL1Q12841 308 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms