RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 ZBED6P86452 979 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 KNOP1Q1ED39 458 aaKnown RBP15.48■□□□□ 0.07
ABCF3-201ENST00000292808 EDRF1Q3B7T1 1238 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 ERO1BQ86YB8 467 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
ABCF3-201ENST00000292808 GPRASP2Q96D09 838 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 R3HDMLQ9H3Y0 253 aa15.48■□□□□ 0.07
ABCF3-201ENST00000292808 ZNHIT6Q9NWK9 470 aaKnown RBP15.48■□□□□ 0.07
ABCF3-201ENST00000292808 REXO2Q9Y3B8 237 aaKnown RBP15.48■□□□□ 0.07
ABCF3-201ENST00000292808 GLTPD2A6NH11 291 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 EPHB6O15197 1021 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 LYPLA2O95372 231 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 GUCY2CP25092 1073 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 NMT1P30419 496 aaKnown RBP15.47■□□□□ 0.07
ABCF3-201ENST00000292808 MARSP56192 900 aaKnown RBP15.47■□□□□ 0.07
ABCF3-201ENST00000292808 FSTL1Q12841 308 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 GADL1Q6ZQY3 521 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 RABGGTAQ92696 567 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 TAF1DQ9H5J8 278 aaPredicted RBP15.47■□□□□ 0.07
ABCF3-201ENST00000292808 ZSWIM4Q9H7M6 989 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 MMRN2Q9H8L6 949 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 FAM207AQ9NSI2 230 aaPredicted RBP15.47■□□□□ 0.07
ABCF3-201ENST00000292808 KCNH4Q9UQ05 1017 aa15.47■□□□□ 0.07
ABCF3-201ENST00000292808 TMEM150BA6NC51 233 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 FAM13AO94988 1023 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 KCNA2P16389 499 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 CCDC40Q4G0X9 1142 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 UTP14CQ5TAP6 766 aaKnown RBP15.46■□□□□ 0.07
ABCF3-201ENST00000292808 SLC35F6Q8N357 371 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 PROCA1Q8NCQ7 364 aaPredicted RBP15.46■□□□□ 0.07
ABCF3-201ENST00000292808 KCND2Q9NZV8 630 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 TRIM10Q9UDY6 481 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 CDC23Q9UJX2 597 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 LRRC37A2A6NM11 1700 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 CNMDO75829 334 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 ZRANB2O95218 330 aaKnown RBP eCLIP15.46■□□□□ 0.07
ABCF3-201ENST00000292808 KIF20AO95235 890 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 QARSP47897 775 aaKnown RBP15.46■□□□□ 0.07
ABCF3-201ENST00000292808 PADI6Q6TGC4 694 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 MYCT1Q8N699 235 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 PARVGQ9HBI0 331 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 DBR1Q9UK59 544 aaKnown RBP15.46■□□□□ 0.07
ABCF3-201ENST00000292808 TFR2Q9UP52 801 aa15.46■□□□□ 0.07
ABCF3-201ENST00000292808 ARHGEF35A5YM69 484 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 TGFB1I1O43294 461 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ATP8B1O43520 1251 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 HIP1RO75146 1068 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 GCNT3O95395 438 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 RARRES1P49788 294 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 TUBB4BP68371 445 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 MEA1Q16626 185 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ZC2HC1CQ53FD0 456 aaPredicted RBP15.45■□□□□ 0.06
ABCF3-201ENST00000292808 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 GPIHBP1Q8IV16 184 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 CHST13Q8NET6 341 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 GUCA1BQ9UMX6 200 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ARID2Q68CP9 1835 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 PDXKO00764 312 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 CXCL11O14625 94 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 KRT76Q01546 638 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 GABPB1Q06547 395 aaPredicted RBP15.45■□□□□ 0.06
ABCF3-201ENST00000292808 DMTNQ08495 405 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ADAM9Q13443 819 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 FIGNQ5HY92 759 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 TMCO3Q6UWJ1 677 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ZNF662Q6ZS27 426 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 SRGAP1Q7Z6B7 1085 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 KSR1Q8IVT5 923 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 CEP112Q8N8E3 955 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 GOLGA1Q92805 767 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 SH2D3AQ9BRG2 576 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 MAF1Q9H063 256 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 ZMYND15Q9H091 742 aa15.45■□□□□ 0.06
ABCF3-201ENST00000292808 NHEJ1Q9H9Q4 299 aaPredicted RBP15.45■□□□□ 0.06
ABCF3-201ENST00000292808 CTAGE9A4FU28 777 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 WDR64B1ANS9 1081 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 NR2F2P24468 414 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 GJA5P36382 358 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 JAK3P52333 1124 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 HERVK_113P62684 666 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 KCNMA1Q12791 1236 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 PPIL2Q13356 520 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 SMCR8Q8TEV9 937 aaPredicted RBP15.44■□□□□ 0.06
ABCF3-201ENST00000292808 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 STRA6Q9BX79 667 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 ASCC2Q9H1I8 757 aaPredicted RBP15.44■□□□□ 0.06
ABCF3-201ENST00000292808 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
ABCF3-201ENST00000292808 FHOD1Q9Y613 1164 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 A0A1W2PQJ5 194 aa15.44■□□□□ 0.06
ABCF3-201ENST00000292808 EIF3DO15371 548 aaKnown RBP eCLIP15.44■□□□□ 0.06
ABCF3-201ENST00000292808 PPP1R37O75864 691 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms