RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SYT2Q8N9I0 419 aaPredicted RBP18.56■□□□□ 0.56
CPSF4-201ENST00000292476 RABGGTAQ92696 567 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 NACC1Q96RE7 527 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 UIMC1Q96RL1 719 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 DESI2Q9BSY9 194 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 GDAQ9Y2T3 454 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 TLR2O60603 784 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 CNMDO75829 334 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 SSBP05455 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
CPSF4-201ENST00000292476 ERCC3P19447 782 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 KCTD2Q14681 263 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 MTF1Q14872 753 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 IQCDQ96DY2 449 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 PARK7Q99497 189 aaKnown RBP18.55■□□□□ 0.56
CPSF4-201ENST00000292476 UNC45AQ9H3U1 944 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 ZNF446Q9NWS9 450 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 TAB2Q9NYJ8 693 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 KCND2Q9NZV8 630 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 CPA4Q9UI42 421 aa18.55■□□□□ 0.56
CPSF4-201ENST00000292476 POTEFA5A3E0 1075 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 E9PMD0 336 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 EML1O00423 815 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 CHMP2AO43633 222 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 SLITRK3O94933 977 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 KIF20AO95235 890 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 P4HBP07237 508 aaKnown RBP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 POTEGQ6S5H5 508 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 POTEEQ6S8J3 1075 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 TMCO3Q6UWJ1 677 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 KCNK18Q7Z418 384 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 IRF2BP1Q8IU81 584 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 FAM114A1Q8IWE2 563 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 GPRC5AQ8NFJ5 357 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 GOLGA1Q92805 767 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 MAGEC2Q9UBF1 373 aaPredicted RBP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 DHX15O43143 795 aaKnown RBP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 DKC1O60832 514 aaKnown RBP eCLIP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 ECM2O94769 699 aaPredicted RBP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 KRT18P05783 430 aaKnown RBP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 SLC12A3P55017 1021 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 ERVK-9P63128 1117 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 ERVK-24P63145 666 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 SP3Q02447 781 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 ZNF746Q6NUN9 644 aaPredicted RBP18.54■□□□□ 0.56
CPSF4-201ENST00000292476 TTI2Q6NXR4 508 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 GPBP1Q86WP2 473 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 TPH2Q8IWU9 490 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 RETREG2Q8NC44 543 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 DYDC2Q96IM9 177 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 SENP7Q9BQF6 1050 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 VPS16Q9H269 839 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 ZSWIM4Q9H7M6 989 aa18.54■□□□□ 0.56
CPSF4-201ENST00000292476 NFASCO94856 1347 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 FCER1AP12319 257 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 IDEP14735 1019 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 CCNE1P24864 410 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 DNM2P50570 870 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 ALDH5A1P51649 535 aaPredicted RBP18.53■□□□□ 0.56
CPSF4-201ENST00000292476 CYP4A11Q02928 519 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 UBXN1Q04323 297 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 DYMQ7RTS9 669 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 CEP112Q8N8E3 955 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 ZNF507Q8TCN5 953 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 CD99L2Q8TCZ2 262 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 CPLX3Q8WVH0 158 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 ZFP91Q96JP5 570 aaPredicted RBP18.53■□□□□ 0.56
CPSF4-201ENST00000292476 DNAJC7Q99615 494 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 NUP58Q9BVL2 599 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 SAMM50Q9Y512 469 aa18.53■□□□□ 0.56
CPSF4-201ENST00000292476 ADGRA2Q96PE1 1338 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 CYP11B2P19099 503 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 ICAM3P32942 547 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 ITGB3BPQ13352 177 aaPredicted RBP18.52■□□□□ 0.56
CPSF4-201ENST00000292476 ZNF662Q6ZS27 426 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 FAM133AQ8N9E0 248 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 TRIM47Q96LD4 638 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 MMP19Q99542 508 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 PANK4Q9NVE7 773 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 CDC23Q9UJX2 597 aa18.52■□□□□ 0.56
CPSF4-201ENST00000292476 SPATA31C2B4DYI2 1134 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 KRT9P35527 623 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 CAP1Q01518 475 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 CTTNQ14247 550 aaKnown RBP18.51■□□□□ 0.55
CPSF4-201ENST00000292476 KCNV1Q6PIU1 500 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 FOXR2Q6PJQ5 311 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 C17orf99Q6UX52 265 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 SRGAP1Q7Z6B7 1085 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 OR8K1Q8NGG5 319 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 P2RX5Q93086 422 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 DNAJC19Q96DA6 116 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 PURBQ96QR8 312 aaKnown RBP18.51■□□□□ 0.55
CPSF4-201ENST00000292476 TXNRD2Q9NNW7 524 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 RGL1Q9NZL6 768 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 CAPN11Q9UMQ6 739 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 ZSWIM8A7E2V4 1837 aa18.51■□□□□ 0.55
CPSF4-201ENST00000292476 CTAGE9A4FU28 777 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 LYPLA2O95372 231 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms