RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZNF618Q5T7W0 954 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 HAUS3Q68CZ6 603 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 CHRDL2Q6WN34 429 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 RSPH3Q86UC2 560 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 CATSPER3Q86XQ3 398 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 ZBTB10Q96DT7 871 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 SCLYQ96I15 445 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 CLIC4Q9Y696 253 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 EVPLQ92817 2033 aa30.12■■■□□ 2.41
SSU72-201ENST00000291386 XRCC6P12956 609 aaKnown RBP eCLIP30.11■■■□□ 2.41
SSU72-201ENST00000291386 YWHABP31946 246 aaKnown RBP30.11■■■□□ 2.41
SSU72-201ENST00000291386 OTUD6AQ7L8S5 288 aa30.11■■■□□ 2.41
SSU72-201ENST00000291386 NME8Q8N427 588 aa30.11■■■□□ 2.41
SSU72-201ENST00000291386 IL23AQ9NPF7 189 aa30.11■■■□□ 2.41
SSU72-201ENST00000291386 SCN5AQ14524 2016 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 MED24O75448 989 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 BRD1O95696 1058 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 RPUSD2Q8IZ73 545 aaKnown RBP30.1■■■□□ 2.41
SSU72-201ENST00000291386 LINC01465Q8N7H1 131 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 DNAJB3Q8WWF6 145 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 USP28Q96RU2 1077 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 UBE2OQ9C0C9 1292 aaKnown RBP30.1■■■□□ 2.41
SSU72-201ENST00000291386 CYP26B1Q9NR63 512 aa30.1■■■□□ 2.41
SSU72-201ENST00000291386 RSPH10B2B2RC85 870 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 PFKMP08237 780 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 RSPH10BP0C881 870 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 NASPP49321 788 aaPredicted RBP30.09■■■□□ 2.41
SSU72-201ENST00000291386 GPNMBQ14956 572 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 MTERF2Q49AM1 385 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 VWCEQ96DN2 955 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 ZNF396Q96N95 335 aaPredicted RBP30.09■■■□□ 2.41
SSU72-201ENST00000291386 FTOQ9C0B1 505 aaKnown RBP eCLIP30.09■■■□□ 2.41
SSU72-201ENST00000291386 ANKEF1Q9NU02 776 aa30.09■■■□□ 2.41
SSU72-201ENST00000291386 ARID2Q68CP9 1835 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 IGKV6-21A0A0C4DH24 114 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 A0A1W2PPC1 479 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 TMEM150BA6NC51 233 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 VWA3AA6NCI4 1184 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 EPHB4P54760 987 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 MGAT3Q09327 533 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 TBC1D8BQ0IIM8 1120 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 C16orf59Q7L2K0 433 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 KIAA0319LQ8IZA0 1049 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 AK8Q96MA6 479 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 COLQQ9Y215 455 aaPredicted RBP30.08■■■□□ 2.41
SSU72-201ENST00000291386 ZDHHC9Q9Y397 364 aa30.08■■■□□ 2.41
SSU72-201ENST00000291386 CXCL10P02778 98 aa30.07■■■□□ 2.4
SSU72-201ENST00000291386 PLA2G4FQ68DD2 849 aa30.07■■■□□ 2.4
SSU72-201ENST00000291386 ATL3Q6DD88 541 aa30.07■■■□□ 2.4
SSU72-201ENST00000291386 EXOC8Q8IYI6 725 aa30.07■■■□□ 2.4
SSU72-201ENST00000291386 FAM49AQ9H0Q0 323 aaPredicted RBP30.07■■■□□ 2.4
SSU72-201ENST00000291386 MAFO75444 373 aaPredicted RBP30.06■■■□□ 2.4
SSU72-201ENST00000291386 SLC39A14Q15043 492 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 FOXD4L5Q5VV16 416 aaPredicted RBP30.06■■■□□ 2.4
SSU72-201ENST00000291386 IER5Q5VY09 327 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 KRT79Q5XKE5 535 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 EFCAB12Q6NXP0 572 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 PSRC1Q6PGN9 363 aaPredicted RBP30.06■■■□□ 2.4
SSU72-201ENST00000291386 SNX29Q8TEQ0 813 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 FOXD4L4Q8WXT5 416 aaPredicted RBP30.06■■■□□ 2.4
SSU72-201ENST00000291386 CEP170P1Q96L14 293 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 NACC1Q96RE7 527 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 JPH2Q9BR39 696 aaPredicted RBP30.06■■■□□ 2.4
SSU72-201ENST00000291386 SIP14410 1827 aa30.06■■■□□ 2.4
SSU72-201ENST00000291386 KDM3AQ9Y4C1 1321 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 ZBTB39O15060 712 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 NBNO60934 754 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 CHRNA1P02708 482 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 TMOD1P28289 359 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 LONP1P36776 959 aaKnown RBP30.05■■■□□ 2.4
SSU72-201ENST00000291386 CCT6AP40227 531 aaKnown RBP30.05■■■□□ 2.4
SSU72-201ENST00000291386 RFC5P40937 340 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 NPEPPSP55786 919 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 MRPS6P82932 125 aaKnown RBP30.05■■■□□ 2.4
SSU72-201ENST00000291386 MBTPS1Q14703 1052 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 SH2D3AQ9BRG2 576 aa30.05■■■□□ 2.4
SSU72-201ENST00000291386 MMTAG2Q9BU76 263 aaKnown RBP30.05■■■□□ 2.4
SSU72-201ENST00000291386 DHX33Q9H6R0 707 aaKnown RBP30.05■■■□□ 2.4
SSU72-201ENST00000291386 DBR1Q9UK59 544 aaKnown RBP30.05■■■□□ 2.4
SSU72-201ENST00000291386 SLC26A4O43511 780 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 CTSHP09668 335 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 DDIT3P35638 169 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 ECM1Q16610 540 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 XKR9Q5GH70 373 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 TMEM240Q5SV17 173 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 HYIQ5T013 277 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 ZNF710Q8N1W2 664 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 KCTD17Q8N5Z5 321 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 ZNF579Q8NAF0 562 aaKnown RBP30.04■■■□□ 2.4
SSU72-201ENST00000291386 SRPRBQ9Y5M8 271 aaKnown RBP30.04■■■□□ 2.4
SSU72-201ENST00000291386 TET1Q8NFU7 2136 aa30.04■■■□□ 2.4
SSU72-201ENST00000291386 PP2D1A8MPX8 630 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 RARRES1P49788 294 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 CEBPZQ03701 1054 aaKnown RBP30.03■■■□□ 2.4
SSU72-201ENST00000291386 POTEGQ6S5H5 508 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 TDHQ8IZJ6 230 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 METTL13Q8N6R0 699 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 LINC00301Q8NCQ3 95 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.03■■■□□ 2.4
SSU72-201ENST00000291386 FBXO2Q9UK22 296 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms